Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF4P48230 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF4P48230 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF4P48230 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF4P48230 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.7■□□□□ 0.74
TM4SF4P48230 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.7■□□□□ 0.74
TM4SF4P48230 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
TM4SF4P48230 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
TM4SF4P48230 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.7■□□□□ 0.74
TM4SF4P48230 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.7■□□□□ 0.74
TM4SF4P48230 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TM4SF4P48230 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF4P48230 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TM4SF4P48230 AC010336.2-201ENST00000564226 506 ntBASIC19.7■□□□□ 0.74
TM4SF4P48230 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.7■□□□□ 0.74
TM4SF4P48230 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.7■□□□□ 0.74
TM4SF4P48230 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF4P48230 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF4P48230 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF4P48230 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TM4SF4P48230 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TM4SF4P48230 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF4P48230 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TM4SF4P48230 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TM4SF4P48230 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
TM4SF4P48230 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF4P48230 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.7■□□□□ 0.74
TM4SF4P48230 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF4P48230 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF4P48230 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.69■□□□□ 0.74
TM4SF4P48230 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF4P48230 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF4P48230 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF4P48230 RPS2P32-201ENST00000439199 892 ntBASIC19.69■□□□□ 0.74
TM4SF4P48230 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF4P48230 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.69■□□□□ 0.74
TM4SF4P48230 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.69■□□□□ 0.74
TM4SF4P48230 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF4P48230 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.69■□□□□ 0.74
TM4SF4P48230 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.69■□□□□ 0.74
TM4SF4P48230 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF4P48230 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.69■□□□□ 0.74
TM4SF4P48230 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.68■□□□□ 0.74
TM4SF4P48230 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.68■□□□□ 0.74
TM4SF4P48230 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.68■□□□□ 0.74
TM4SF4P48230 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TM4SF4P48230 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TM4SF4P48230 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 AC138969.3-201ENST00000546612 1459 ntBASIC19.68■□□□□ 0.74
TM4SF4P48230 AC138932.2-201ENST00000548268 1459 ntBASIC19.68■□□□□ 0.74
TM4SF4P48230 AC126755.4-201ENST00000549796 1459 ntBASIC19.68■□□□□ 0.74
TM4SF4P48230 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TM4SF4P48230 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.68■□□□□ 0.74
TM4SF4P48230 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 AC098614.1-201ENST00000368528 745 ntBASIC19.68■□□□□ 0.74
TM4SF4P48230 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 AL353779.1-201ENST00000434793 351 ntBASIC19.68■□□□□ 0.74
TM4SF4P48230 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.68■□□□□ 0.74
TM4SF4P48230 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.68■□□□□ 0.74
TM4SF4P48230 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.68■□□□□ 0.74
TM4SF4P48230 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.68■□□□□ 0.74
TM4SF4P48230 GIMAP3P-201ENST00000495150 836 ntBASIC19.68■□□□□ 0.74
TM4SF4P48230 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.68■□□□□ 0.74
TM4SF4P48230 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.68■□□□□ 0.74
TM4SF4P48230 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.68■□□□□ 0.74
TM4SF4P48230 AC017083.2-201ENST00000608069 979 ntBASIC19.68■□□□□ 0.74
TM4SF4P48230 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TM4SF4P48230 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF4P48230 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TM4SF4P48230 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.67■□□□□ 0.74
TM4SF4P48230 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF4P48230 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
TM4SF4P48230 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TM4SF4P48230 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.67■□□□□ 0.74
TM4SF4P48230 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.67■□□□□ 0.74
TM4SF4P48230 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.67■□□□□ 0.74
TM4SF4P48230 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.67■□□□□ 0.74
TM4SF4P48230 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.67■□□□□ 0.74
TM4SF4P48230 API5-211ENST00000534695 560 ntTSL 5 BASIC19.67■□□□□ 0.74
TM4SF4P48230 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.67■□□□□ 0.74
TM4SF4P48230 AL138828.2-201ENST00000615812 383 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms