Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 AC005915.1-201ENST00000624912 2018 ntBASIC15.24■□□□□ 0.03
GDNFP39905 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
GDNFP39905 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
GDNFP39905 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.24■□□□□ 0.03
GDNFP39905 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.24■□□□□ 0.03
GDNFP39905 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.24■□□□□ 0.03
GDNFP39905 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.24■□□□□ 0.03
GDNFP39905 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.24■□□□□ 0.03
GDNFP39905 AC145285.6-201ENST00000604632 637 ntBASIC15.24■□□□□ 0.03
GDNFP39905 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 AC073912.3-201ENST00000624414 853 ntBASIC15.24■□□□□ 0.03
GDNFP39905 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 AC133561.5-201ENST00000635547 218 ntBASIC15.24■□□□□ 0.03
GDNFP39905 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.24■□□□□ 0.03
GDNFP39905 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
GDNFP39905 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
GDNFP39905 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 AC026691.1-201ENST00000602502 2017 ntBASIC15.24■□□□□ 0.03
GDNFP39905 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.24■□□□□ 0.03
GDNFP39905 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.24■□□□□ 0.03
GDNFP39905 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GDNFP39905 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
GDNFP39905 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDNFP39905 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.23■□□□□ 0.03
GDNFP39905 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.23■□□□□ 0.03
GDNFP39905 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.23■□□□□ 0.03
GDNFP39905 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.23■□□□□ 0.03
GDNFP39905 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GDNFP39905 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.23■□□□□ 0.03
GDNFP39905 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.23■□□□□ 0.03
GDNFP39905 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
GDNFP39905 KRT18P23-201ENST00000435622 1283 ntBASIC15.23■□□□□ 0.03
GDNFP39905 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.23■□□□□ 0.03
GDNFP39905 AC009947.2-201ENST00000444014 672 ntBASIC15.23■□□□□ 0.03
GDNFP39905 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.23■□□□□ 0.03
GDNFP39905 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GDNFP39905 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
GDNFP39905 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GDNFP39905 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.23■□□□□ 0.03
GDNFP39905 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDNFP39905 AL024508.2-201ENST00000607749 1894 ntBASIC15.23■□□□□ 0.03
GDNFP39905 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.22■□□□□ 0.03
GDNFP39905 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.22■□□□□ 0.03
GDNFP39905 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 AC132938.6-201ENST00000623828 1655 ntBASIC15.22■□□□□ 0.03
GDNFP39905 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 REXO1L11P-201ENST00000620964 1927 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms