Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.44■□□□□ 0.54
RFC1P35251 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RFC1P35251 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RFC1P35251 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.44■□□□□ 0.54
RFC1P35251 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RFC1P35251 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.44■□□□□ 0.54
RFC1P35251 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.44■□□□□ 0.54
RFC1P35251 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.44■□□□□ 0.54
RFC1P35251 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.44■□□□□ 0.54
RFC1P35251 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 BNIP3P18-201ENST00000593976 575 ntBASIC18.44■□□□□ 0.54
RFC1P35251 AC011467.2-201ENST00000598425 242 ntBASIC18.44■□□□□ 0.54
RFC1P35251 AL139327.4-201ENST00000612362 153 ntBASIC18.44■□□□□ 0.54
RFC1P35251 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.44■□□□□ 0.54
RFC1P35251 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.44■□□□□ 0.54
RFC1P35251 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RFC1P35251 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.44■□□□□ 0.54
RFC1P35251 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
RFC1P35251 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFC1P35251 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFC1P35251 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFC1P35251 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
RFC1P35251 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RFC1P35251 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFC1P35251 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
RFC1P35251 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.43■□□□□ 0.54
RFC1P35251 MINOS1P3-201ENST00000457048 203 ntBASIC18.43■□□□□ 0.54
RFC1P35251 AP000867.3-201ENST00000524675 377 ntBASIC18.43■□□□□ 0.54
RFC1P35251 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.43■□□□□ 0.54
RFC1P35251 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.43■□□□□ 0.54
RFC1P35251 AC092329.2-201ENST00000598402 547 ntBASIC18.43■□□□□ 0.54
RFC1P35251 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFC1P35251 AC093458.2-201ENST00000623150 629 ntBASIC18.43■□□□□ 0.54
RFC1P35251 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RFC1P35251 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RFC1P35251 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.43■□□□□ 0.54
RFC1P35251 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC1P35251 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.42■□□□□ 0.54
RFC1P35251 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC1P35251 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC1P35251 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.42■□□□□ 0.54
RFC1P35251 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.42■□□□□ 0.54
RFC1P35251 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 KRT8P10-201ENST00000450021 1447 ntBASIC18.42■□□□□ 0.54
RFC1P35251 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RFC1P35251 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC1P35251 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.42■□□□□ 0.54
RFC1P35251 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 AC103564.2-201ENST00000432853 1299 ntBASIC18.42■□□□□ 0.54
RFC1P35251 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.42■□□□□ 0.54
RFC1P35251 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 AC074051.2-201ENST00000565115 352 ntBASIC18.42■□□□□ 0.54
RFC1P35251 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.42■□□□□ 0.54
RFC1P35251 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.42■□□□□ 0.54
RFC1P35251 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.42■□□□□ 0.54
RFC1P35251 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RFC1P35251 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC1P35251 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.42■□□□□ 0.54
RFC1P35251 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RFC1P35251 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RFC1P35251 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC1P35251 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RFC1P35251 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.41■□□□□ 0.54
RFC1P35251 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RFC1P35251 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RFC1P35251 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.41■□□□□ 0.54
RFC1P35251 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.41■□□□□ 0.54
RFC1P35251 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms