Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX1P22670 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX1P22670 AC016396.2-201ENST00000562575 1417 ntBASIC19.03■□□□□ 0.64
RFX1P22670 CROCCP2-202ENST00000412962 2773 ntBASIC19.03■□□□□ 0.64
RFX1P22670 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX1P22670 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX1P22670 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RFX1P22670 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RFX1P22670 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
RFX1P22670 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.03■□□□□ 0.64
RFX1P22670 TERC-201ENST00000602385 541 ntBASIC19.03■□□□□ 0.64
RFX1P22670 REXO1L6P-202ENST00000619970 1078 ntBASIC19.03■□□□□ 0.64
RFX1P22670 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
RFX1P22670 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX1P22670 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX1P22670 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX1P22670 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RFX1P22670 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RFX1P22670 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RFX1P22670 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.02■□□□□ 0.64
RFX1P22670 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RFX1P22670 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 COX5BP2-201ENST00000392354 334 ntBASIC19.02■□□□□ 0.64
RFX1P22670 FAM197Y8-203ENST00000450145 560 ntBASIC19.02■□□□□ 0.64
RFX1P22670 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.02■□□□□ 0.64
RFX1P22670 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.02■□□□□ 0.64
RFX1P22670 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RFX1P22670 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.02■□□□□ 0.64
RFX1P22670 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.02■□□□□ 0.64
RFX1P22670 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.02■□□□□ 0.64
RFX1P22670 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.02■□□□□ 0.64
RFX1P22670 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.02■□□□□ 0.64
RFX1P22670 AL592071.1-201ENST00000611956 408 ntBASIC19.02■□□□□ 0.64
RFX1P22670 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.02■□□□□ 0.64
RFX1P22670 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.02■□□□□ 0.64
RFX1P22670 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFX1P22670 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
RFX1P22670 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFX1P22670 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RFX1P22670 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFX1P22670 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFX1P22670 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFX1P22670 OR6D1P-202ENST00000641007 5290 ntBASIC19.02■□□□□ 0.63
RFX1P22670 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RFX1P22670 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 NSUN5P1-202ENST00000421140 1535 ntBASIC19.01■□□□□ 0.63
RFX1P22670 NSUN5P2-203ENST00000457352 1529 ntBASIC19.01■□□□□ 0.63
RFX1P22670 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
RFX1P22670 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.01■□□□□ 0.63
RFX1P22670 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RFX1P22670 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.01■□□□□ 0.63
RFX1P22670 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.01■□□□□ 0.63
RFX1P22670 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RFX1P22670 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.01■□□□□ 0.63
RFX1P22670 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 AKR1C7P-201ENST00000305623 895 ntBASIC19.01■□□□□ 0.63
RFX1P22670 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.01■□□□□ 0.63
RFX1P22670 RN7SL606P-201ENST00000472779 293 ntBASIC19.01■□□□□ 0.63
RFX1P22670 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms