Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.82■□□□□ 0.92
NCLP19338 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.82■□□□□ 0.92
NCLP19338 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.82■□□□□ 0.92
NCLP19338 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.82■□□□□ 0.92
NCLP19338 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.82■□□□□ 0.92
NCLP19338 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.82■□□□□ 0.92
NCLP19338 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.82■□□□□ 0.92
NCLP19338 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 PCDH8P1-201ENST00000428983 2773 ntBASIC20.82■□□□□ 0.92
NCLP19338 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NCLP19338 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NCLP19338 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCLP19338 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 AC132938.6-201ENST00000623828 1655 ntBASIC20.81■□□□□ 0.92
NCLP19338 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NCLP19338 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
NCLP19338 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NCLP19338 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
NCLP19338 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.81■□□□□ 0.92
NCLP19338 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.81■□□□□ 0.92
NCLP19338 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NCLP19338 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
NCLP19338 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NCLP19338 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NCLP19338 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NCLP19338 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCLP19338 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.81■□□□□ 0.92
NCLP19338 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
NCLP19338 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 AC008741.2-201ENST00000612792 3115 ntBASIC20.8■□□□□ 0.92
NCLP19338 AC133963.1-201ENST00000504166 1679 ntBASIC20.8■□□□□ 0.92
NCLP19338 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NCLP19338 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC20.8■□□□□ 0.92
NCLP19338 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.8■□□□□ 0.92
NCLP19338 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.8■□□□□ 0.92
NCLP19338 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
NCLP19338 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.8■□□□□ 0.92
NCLP19338 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.8■□□□□ 0.92
NCLP19338 AC010240.3-201ENST00000607688 395 ntBASIC20.8■□□□□ 0.92
NCLP19338 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.8■□□□□ 0.92
NCLP19338 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
NCLP19338 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
NCLP19338 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.8■□□□□ 0.92
NCLP19338 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
NCLP19338 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
NCLP19338 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NCLP19338 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCLP19338 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NCLP19338 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NCLP19338 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms