Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CSB-PGBD3P0DP91 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
CSB-PGBD3P0DP91 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 AL671277.1-201ENST00000429656 993 ntBASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 DUX4L27-201ENST00000554796 1261 ntBASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 Z92544.3-201ENST00000624747 417 ntBASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CSB-PGBD3P0DP91 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 WBP2-203ENST00000433525 928 ntTSL 2 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 AC093214.1-201ENST00000511688 1107 ntBASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 AC009093.7-201ENST00000623853 1223 ntBASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CSB-PGBD3P0DP91 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 CYP51A1P2-201ENST00000419457 1499 ntBASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 AL355306.1-201ENST00000415580 579 ntBASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 SPDYE11-202ENST00000450699 704 ntBASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 SLC25A6P2-201ENST00000497974 877 ntBASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 KRT8P48-201ENST00000515599 1220 ntBASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 SPDYE9P-201ENST00000570642 692 ntBASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 AL390955.2-201ENST00000603032 514 ntBASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 SPDYE10P-202ENST00000612005 668 ntBASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 SPDYE8P-202ENST00000612377 668 ntBASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 AL135999.2-201ENST00000622438 1686 ntBASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CSB-PGBD3P0DP91 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms