Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SCAF4O95104 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCAF4O95104 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.38□□□□□ -0.11
SCAF4O95104 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.37□□□□□ -0.11
SCAF4O95104 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.37□□□□□ -0.11
SCAF4O95104 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SCAF4O95104 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 GPAT2P1-201ENST00000444924 1672 ntBASIC14.37□□□□□ -0.11
SCAF4O95104 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.37□□□□□ -0.11
SCAF4O95104 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.37□□□□□ -0.11
SCAF4O95104 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.37□□□□□ -0.11
SCAF4O95104 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.37□□□□□ -0.11
SCAF4O95104 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.37□□□□□ -0.11
SCAF4O95104 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SCAF4O95104 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.37□□□□□ -0.11
SCAF4O95104 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SCAF4O95104 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCAF4O95104 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SCAF4O95104 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.36□□□□□ -0.11
SCAF4O95104 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SCAF4O95104 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.36□□□□□ -0.11
SCAF4O95104 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
SCAF4O95104 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SCAF4O95104 KRT8P9-201ENST00000558927 1449 ntBASIC14.36□□□□□ -0.11
SCAF4O95104 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SCAF4O95104 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 AC087499.1-201ENST00000418141 1075 ntBASIC14.36□□□□□ -0.11
SCAF4O95104 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.36□□□□□ -0.11
SCAF4O95104 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.36□□□□□ -0.11
SCAF4O95104 FITM1-202ENST00000559294 800 ntBASIC14.36□□□□□ -0.11
SCAF4O95104 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.36□□□□□ -0.11
SCAF4O95104 AC008622.2-201ENST00000617006 1229 ntBASIC14.36□□□□□ -0.11
SCAF4O95104 AC133561.5-201ENST00000635547 218 ntBASIC14.36□□□□□ -0.11
SCAF4O95104 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 CROCCP2-202ENST00000412962 2773 ntBASIC14.36□□□□□ -0.11
SCAF4O95104 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SCAF4O95104 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.36□□□□□ -0.11
SCAF4O95104 AC106886.4-201ENST00000623557 2502 ntBASIC14.36□□□□□ -0.11
SCAF4O95104 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCAF4O95104 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms