Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.38■□□□□ 0.37
KLHL41O60662 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.38■□□□□ 0.37
KLHL41O60662 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.38■□□□□ 0.37
KLHL41O60662 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.38■□□□□ 0.37
KLHL41O60662 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.38■□□□□ 0.37
KLHL41O60662 AL121672.3-201ENST00000608644 468 ntBASIC17.38■□□□□ 0.37
KLHL41O60662 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KLHL41O60662 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KLHL41O60662 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KLHL41O60662 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.38■□□□□ 0.37
KLHL41O60662 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
KLHL41O60662 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.37■□□□□ 0.37
KLHL41O60662 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 SPDYE15P-201ENST00000424157 909 ntBASIC17.37■□□□□ 0.37
KLHL41O60662 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 AC104390.1-201ENST00000555663 520 ntBASIC17.37■□□□□ 0.37
KLHL41O60662 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.37■□□□□ 0.37
KLHL41O60662 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.37■□□□□ 0.37
KLHL41O60662 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.37■□□□□ 0.37
KLHL41O60662 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KLHL41O60662 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL41O60662 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
KLHL41O60662 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL41O60662 AC011270.2-201ENST00000624293 2550 ntBASIC17.36■□□□□ 0.37
KLHL41O60662 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHL41O60662 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KLHL41O60662 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
KLHL41O60662 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHL41O60662 AC008894.3-201ENST00000624324 3103 ntBASIC17.36■□□□□ 0.37
KLHL41O60662 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.36■□□□□ 0.37
KLHL41O60662 BX276092.5-203ENST00000456199 560 ntBASIC17.36■□□□□ 0.37
KLHL41O60662 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHL41O60662 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHL41O60662 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
KLHL41O60662 AC112497.1-201ENST00000624824 639 ntBASIC17.36■□□□□ 0.37
KLHL41O60662 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.36■□□□□ 0.37
KLHL41O60662 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
KLHL41O60662 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.36■□□□□ 0.37
KLHL41O60662 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHL41O60662 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL41O60662 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms