Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP2AO43633 AC009336.1-201ENST00000608941 1553 ntBASIC19.66■□□□□ 0.74
CHMP2AO43633 HLA-J-201ENST00000462773 1622 ntBASIC19.65■□□□□ 0.74
CHMP2AO43633 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CHMP2AO43633 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CHMP2AO43633 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.65■□□□□ 0.74
CHMP2AO43633 GNAS-203ENST00000306120 1878 ntBASIC19.65■□□□□ 0.74
CHMP2AO43633 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHMP2AO43633 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.65■□□□□ 0.74
CHMP2AO43633 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 MYCLP1-201ENST00000372451 1075 ntBASIC19.65■□□□□ 0.74
CHMP2AO43633 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 RNA5SP419-201ENST00000515908 135 ntBASIC19.65■□□□□ 0.74
CHMP2AO43633 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.65■□□□□ 0.74
CHMP2AO43633 OR7E14P-202ENST00000530490 1290 ntBASIC19.65■□□□□ 0.74
CHMP2AO43633 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.65■□□□□ 0.74
CHMP2AO43633 FAM215A-202ENST00000632077 792 ntBASIC19.65■□□□□ 0.74
CHMP2AO43633 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHMP2AO43633 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CHMP2AO43633 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP2AO43633 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CHMP2AO43633 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.65■□□□□ 0.74
CHMP2AO43633 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CHMP2AO43633 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.64■□□□□ 0.74
CHMP2AO43633 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP2AO43633 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP2AO43633 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP2AO43633 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CHMP2AO43633 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CHMP2AO43633 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.64■□□□□ 0.73
CHMP2AO43633 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CHMP2AO43633 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHMP2AO43633 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.64■□□□□ 0.73
CHMP2AO43633 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.64■□□□□ 0.73
CHMP2AO43633 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2AO43633 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2AO43633 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CHMP2AO43633 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2AO43633 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.64■□□□□ 0.73
CHMP2AO43633 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.64■□□□□ 0.73
CHMP2AO43633 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.64■□□□□ 0.73
CHMP2AO43633 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHMP2AO43633 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2AO43633 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.64■□□□□ 0.73
CHMP2AO43633 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP2AO43633 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHMP2AO43633 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CHMP2AO43633 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CHMP2AO43633 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP2AO43633 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 AC133963.1-201ENST00000504166 1679 ntBASIC19.63■□□□□ 0.73
CHMP2AO43633 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP2AO43633 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CHMP2AO43633 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.63■□□□□ 0.73
CHMP2AO43633 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CHMP2AO43633 SIGLEC30P-201ENST00000455569 941 ntBASIC19.63■□□□□ 0.73
CHMP2AO43633 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.63■□□□□ 0.73
CHMP2AO43633 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CHMP2AO43633 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.63■□□□□ 0.73
CHMP2AO43633 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CHMP2AO43633 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2AO43633 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CHMP2AO43633 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP2AO43633 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CHMP2AO43633 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP2AO43633 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2AO43633 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms