Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 AC008608.2-201ENST00000606089 416 ntBASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 AC007967.3-201ENST00000434308 558 ntBASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 FAM197Y8-203ENST00000450145 560 ntBASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PTPDC1A2A3K4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 AP001094.4-201ENST00000579008 2176 ntBASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 COX5BP2-201ENST00000392354 334 ntBASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 INTS4P1-201ENST00000438455 1935 ntBASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms