Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 LINC00304-203ENST00000565008 1864 ntBASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 AL031133.1-201ENST00000406807 723 ntBASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 BX276092.5-203ENST00000456199 560 ntBASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 AL592071.1-201ENST00000611956 408 ntBASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 VENTXP7-201ENST00000475503 772 ntBASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 KRT8P26-201ENST00000534154 1276 ntBASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRGV1A0A0A0MS02 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV1A0A0A0MS02 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV1A0A0A0MS02 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms