Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 LINC00554-201ENST00000564841 3011 ntBASIC16.58■□□□□ 0.24
AP4S1Q9Y587 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 AC007950.2-201ENST00000615045 2347 ntBASIC16.57■□□□□ 0.24
AP4S1Q9Y587 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 AC026366.1-201ENST00000488803 879 ntBASIC16.57■□□□□ 0.24
AP4S1Q9Y587 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 AC008687.5-201ENST00000593746 558 ntBASIC16.57■□□□□ 0.24
AP4S1Q9Y587 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 AC073195.1-201ENST00000607241 877 ntBASIC16.57■□□□□ 0.24
AP4S1Q9Y587 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 AL513523.2-202ENST00000427283 2040 ntBASIC16.57■□□□□ 0.24
AP4S1Q9Y587 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
AP4S1Q9Y587 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 AC022188.1-201ENST00000620960 1664 ntBASIC16.56■□□□□ 0.24
AP4S1Q9Y587 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 LINC01311-201ENST00000565162 1445 ntBASIC16.56■□□□□ 0.24
AP4S1Q9Y587 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 SLC25A1P4-201ENST00000567977 778 ntBASIC16.56■□□□□ 0.24
AP4S1Q9Y587 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 AC112497.1-201ENST00000624824 639 ntBASIC16.56■□□□□ 0.24
AP4S1Q9Y587 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 AC068418.2-201ENST00000577309 3703 ntBASIC16.56■□□□□ 0.24
AP4S1Q9Y587 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.56■□□□□ 0.24
AP4S1Q9Y587 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms