Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 PP12613-201ENST00000424958 2230 ntBASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 PON3-203ENST00000427422 894 ntTSL 3 BASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 PAWRP1-201ENST00000451083 565 ntBASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 AC132008.2-207ENST00000454517 770 ntBASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 MIR5100-201ENST00000579544 119 ntBASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 AC106028.4-201ENST00000614509 607 ntBASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 AC133485.6-201ENST00000624045 688 ntBASIC26.14■■□□□ 1.77
SCAF1Q9H7N4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 CD63-204ENST00000546939 779 ntTSL 3 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 GPR32P1-201ENST00000601788 811 ntBASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 CROCCP2-202ENST00000412962 2773 ntBASIC26.13■■□□□ 1.77
SCAF1Q9H7N4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 AP000568.1-201ENST00000282964 442 ntBASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 MIR770-201ENST00000390219 98 ntBASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 POM121L3P-201ENST00000419331 1163 ntBASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCAF1Q9H7N4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 DDT-203ENST00000403754 569 ntTSL 3 BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 AC022494.1-201ENST00000466044 728 ntBASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC26.11■■□□□ 1.77
SCAF1Q9H7N4 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms