Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.77■□□□□ 0.44
PHACTR1Q9C0D0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PHACTR1Q9C0D0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 AP003733.1-201ENST00000491725 852 ntBASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHACTR1Q9C0D0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 COX11P1-201ENST00000489116 835 ntBASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 AL441883.1-201ENST00000566170 1045 ntBASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 AC140113.3-201ENST00000605663 199 ntBASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 AC019129.2-201ENST00000609837 1235 ntBASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 AC005915.1-201ENST00000624912 2018 ntBASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHACTR1Q9C0D0 AC010460.3-201ENST00000511359 1579 ntBASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.74■□□□□ 0.43
PHACTR1Q9C0D0 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms