Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RAD9AQ99638 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
RAD9AQ99638 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.56■□□□□ 0.56
RAD9AQ99638 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.56■□□□□ 0.56
RAD9AQ99638 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.56■□□□□ 0.56
RAD9AQ99638 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.56■□□□□ 0.56
RAD9AQ99638 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.56■□□□□ 0.56
RAD9AQ99638 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.56■□□□□ 0.56
RAD9AQ99638 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.56■□□□□ 0.56
RAD9AQ99638 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.56■□□□□ 0.56
RAD9AQ99638 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.56■□□□□ 0.56
RAD9AQ99638 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.56■□□□□ 0.56
RAD9AQ99638 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.56■□□□□ 0.56
RAD9AQ99638 RN7SL589P-201ENST00000481268 310 ntBASIC18.56■□□□□ 0.56
RAD9AQ99638 TERF1P3-201ENST00000505638 1227 ntBASIC18.56■□□□□ 0.56
RAD9AQ99638 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.56■□□□□ 0.56
RAD9AQ99638 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.56■□□□□ 0.56
RAD9AQ99638 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.56■□□□□ 0.56
RAD9AQ99638 AC087641.1-201ENST00000557561 1021 ntBASIC18.56■□□□□ 0.56
RAD9AQ99638 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.56■□□□□ 0.56
RAD9AQ99638 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.56■□□□□ 0.56
RAD9AQ99638 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.56■□□□□ 0.56
RAD9AQ99638 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
RAD9AQ99638 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.56■□□□□ 0.56
RAD9AQ99638 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAD9AQ99638 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RAD9AQ99638 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RAD9AQ99638 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.55■□□□□ 0.56
RAD9AQ99638 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 TUBB3P1-201ENST00000405796 1332 ntBASIC18.55■□□□□ 0.56
RAD9AQ99638 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.55■□□□□ 0.56
RAD9AQ99638 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.55■□□□□ 0.56
RAD9AQ99638 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAD9AQ99638 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.55■□□□□ 0.56
RAD9AQ99638 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.55■□□□□ 0.56
RAD9AQ99638 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.55■□□□□ 0.56
RAD9AQ99638 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.55■□□□□ 0.56
RAD9AQ99638 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.55■□□□□ 0.56
RAD9AQ99638 AC079140.1-201ENST00000508039 487 ntBASIC18.55■□□□□ 0.56
RAD9AQ99638 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.55■□□□□ 0.56
RAD9AQ99638 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 AP001059.3-201ENST00000619053 235 ntBASIC18.55■□□□□ 0.56
RAD9AQ99638 AL645728.2-201ENST00000641974 660 ntBASIC18.55■□□□□ 0.56
RAD9AQ99638 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.55■□□□□ 0.56
RAD9AQ99638 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD9AQ99638 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.55■□□□□ 0.56
RAD9AQ99638 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.54■□□□□ 0.56
RAD9AQ99638 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.54■□□□□ 0.56
RAD9AQ99638 MIR943-201ENST00000401286 94 ntBASIC18.54■□□□□ 0.56
RAD9AQ99638 AC236430.1-201ENST00000402231 743 ntBASIC18.54■□□□□ 0.56
RAD9AQ99638 TFAMP1-201ENST00000412727 736 ntBASIC18.54■□□□□ 0.56
RAD9AQ99638 KRT18P32-201ENST00000424695 1287 ntBASIC18.54■□□□□ 0.56
RAD9AQ99638 AC002472.2-201ENST00000442739 958 ntBASIC18.54■□□□□ 0.56
RAD9AQ99638 TSPY16P-201ENST00000449843 468 ntBASIC18.54■□□□□ 0.56
RAD9AQ99638 SLC25A6P2-201ENST00000497974 877 ntBASIC18.54■□□□□ 0.56
RAD9AQ99638 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.54■□□□□ 0.56
RAD9AQ99638 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.54■□□□□ 0.56
RAD9AQ99638 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.54■□□□□ 0.56
RAD9AQ99638 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.54■□□□□ 0.56
RAD9AQ99638 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.54■□□□□ 0.56
RAD9AQ99638 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms