Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 EGFEM1P-202ENST00000431685 1563 ntBASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP2Q96SN8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 AC116353.5-201ENST00000638148 1699 ntBASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 AC092183.1-201ENST00000469884 875 ntBASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 AL031432.2-201ENST00000566714 459 ntBASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 AL928711.1-201ENST00000570165 459 ntBASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 MIR3687-2-201ENST00000577708 61 ntBASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 MIR3687-1-201ENST00000614492 61 ntBASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.86
CDK5RAP2Q96SN8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 NOC2LP2-201ENST00000407594 1944 ntBASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 AC005829.1-201ENST00000570002 483 ntBASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 AC023141.13-201ENST00000604991 943 ntBASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP2Q96SN8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 BCAR1-209ENST00000546196 1340 ntBASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 DUX4L17-201ENST00000557360 1267 ntBASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.38■□□□□ 0.85
CDK5RAP2Q96SN8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 TSEN15P1-201ENST00000423257 515 ntBASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 AC140658.5-201ENST00000438532 169 ntBASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDK5RAP2Q96SN8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms