Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 BX276092.5-203ENST00000456199 560 ntBASIC17.82■□□□□ 0.44
RTP4Q96DX8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.82■□□□□ 0.44
RTP4Q96DX8 AC012313.10-201ENST00000623509 926 ntBASIC17.82■□□□□ 0.44
RTP4Q96DX8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 AC099398.1-201ENST00000567919 2776 ntBASIC17.81■□□□□ 0.44
RTP4Q96DX8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 AC124947.2-201ENST00000547118 1133 ntBASIC17.81■□□□□ 0.44
RTP4Q96DX8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 AC092119.3-201ENST00000612618 583 ntBASIC17.81■□□□□ 0.44
RTP4Q96DX8 AD001527.2-201ENST00000622994 785 ntBASIC17.81■□□□□ 0.44
RTP4Q96DX8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RTP4Q96DX8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTP4Q96DX8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 AC009336.1-201ENST00000608941 1553 ntBASIC17.8■□□□□ 0.44
RTP4Q96DX8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 TPM4P1-201ENST00000436100 807 ntBASIC17.8■□□□□ 0.44
RTP4Q96DX8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 VENTXP7-201ENST00000475503 772 ntBASIC17.8■□□□□ 0.44
RTP4Q96DX8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 AC092053.1-201ENST00000605787 1936 ntBASIC17.8■□□□□ 0.44
RTP4Q96DX8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTP4Q96DX8 AGGF1P2-201ENST00000426656 2106 ntBASIC17.8■□□□□ 0.44
RTP4Q96DX8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTP4Q96DX8 AC106886.4-201ENST00000623557 2502 ntBASIC17.79■□□□□ 0.44
RTP4Q96DX8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms