Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 AL592309.1-201ENST00000443127 649 ntBASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 AC084121.4-201ENST00000641598 221 ntBASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 AF228730.8-201ENST00000642140 221 ntBASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 HMGA1P7-201ENST00000406908 502 ntBASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 LINC01451-201ENST00000623792 534 ntBASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
COL27A1Q8IZC6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 MRPS18AP1-201ENST00000414458 589 ntBASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 AC002472.2-201ENST00000442739 958 ntBASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 AC087641.1-201ENST00000557561 1021 ntBASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 AC140878.1-201ENST00000565277 250 ntBASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 AC090164.3-201ENST00000610780 2143 ntBASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 AC098818.2-201ENST00000564925 2320 ntBASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL27A1Q8IZC6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL27A1Q8IZC6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 GNAS-203ENST00000306120 1878 ntBASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms