Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 AC012313.1-201ENST00000593393 3059 ntBASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 PP12613-201ENST00000424958 2230 ntBASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 RBM17P3-201ENST00000417687 1192 ntBASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 AC103564.2-201ENST00000432853 1299 ntBASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 AC141586.5-201ENST00000624546 2050 ntBASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.24■□□□□ 0.51
TTC39BQ5VTQ0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TTC39BQ5VTQ0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms