Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARS2Q5ST30 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.49■□□□□ 0.55
VARS2Q5ST30 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARS2Q5ST30 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VARS2Q5ST30 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARS2Q5ST30 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 AC026471.1-201ENST00000564629 3026 ntBASIC18.48■□□□□ 0.55
VARS2Q5ST30 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 RPSAP43-201ENST00000402237 625 ntBASIC18.48■□□□□ 0.55
VARS2Q5ST30 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 PRSS29P-201ENST00000440800 595 ntBASIC18.48■□□□□ 0.55
VARS2Q5ST30 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 AC079781.4-201ENST00000641908 219 ntBASIC18.48■□□□□ 0.55
VARS2Q5ST30 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 AC046185.3-201ENST00000623228 1824 ntBASIC18.48■□□□□ 0.55
VARS2Q5ST30 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VARS2Q5ST30 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARS2Q5ST30 AC135050.7-201ENST00000624508 2218 ntBASIC18.47■□□□□ 0.55
VARS2Q5ST30 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 AP002414.1-201ENST00000391405 1147 ntBASIC18.47■□□□□ 0.55
VARS2Q5ST30 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 ACTG1P4-201ENST00000425123 1122 ntBASIC18.47■□□□□ 0.55
VARS2Q5ST30 RPS8P6-201ENST00000426177 609 ntBASIC18.47■□□□□ 0.55
VARS2Q5ST30 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 DNAJB3-201ENST00000446806 729 ntBASIC18.47■□□□□ 0.55
VARS2Q5ST30 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 HCG4B-203ENST00000450128 991 ntBASIC18.47■□□□□ 0.55
VARS2Q5ST30 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARS2Q5ST30 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VARS2Q5ST30 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 AC112482.1-201ENST00000492080 688 ntBASIC18.46■□□□□ 0.55
VARS2Q5ST30 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 LINC01451-201ENST00000623792 534 ntBASIC18.46■□□□□ 0.55
VARS2Q5ST30 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms