Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NFX1Q12986 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.22■□□□□ 0.67
NFX1Q12986 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.22■□□□□ 0.67
NFX1Q12986 SIGLEC30P-201ENST00000455569 941 ntBASIC19.22■□□□□ 0.67
NFX1Q12986 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NFX1Q12986 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.22■□□□□ 0.67
NFX1Q12986 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.22■□□□□ 0.67
NFX1Q12986 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.22■□□□□ 0.67
NFX1Q12986 AL691403.2-201ENST00000618460 490 ntBASIC19.22■□□□□ 0.67
NFX1Q12986 AC004706.3-202ENST00000621574 984 ntBASIC19.22■□□□□ 0.67
NFX1Q12986 AC055717.3-201ENST00000622967 595 ntBASIC19.22■□□□□ 0.67
NFX1Q12986 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NFX1Q12986 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.22■□□□□ 0.67
NFX1Q12986 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NFX1Q12986 AP000997.3-201ENST00000623333 2250 ntBASIC19.22■□□□□ 0.67
NFX1Q12986 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.22■□□□□ 0.67
NFX1Q12986 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.22■□□□□ 0.67
NFX1Q12986 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
NFX1Q12986 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.22■□□□□ 0.67
NFX1Q12986 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFX1Q12986 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 BX276092.7-203ENST00000637198 1536 ntBASIC19.21■□□□□ 0.67
NFX1Q12986 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NFX1Q12986 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
NFX1Q12986 YBX2P1-201ENST00000394192 760 ntBASIC19.21■□□□□ 0.67
NFX1Q12986 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.21■□□□□ 0.67
NFX1Q12986 AC023274.1-201ENST00000418278 595 ntBASIC19.21■□□□□ 0.67
NFX1Q12986 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.21■□□□□ 0.67
NFX1Q12986 AC019129.2-201ENST00000609837 1235 ntBASIC19.21■□□□□ 0.67
NFX1Q12986 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.21■□□□□ 0.67
NFX1Q12986 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NFX1Q12986 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 AC008764.6-201ENST00000595909 2069 ntBASIC19.21■□□□□ 0.67
NFX1Q12986 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NFX1Q12986 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.21■□□□□ 0.67
NFX1Q12986 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.21■□□□□ 0.67
NFX1Q12986 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NFX1Q12986 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.66
NFX1Q12986 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 PCDHB18P-201ENST00000524813 2368 ntBASIC19.2■□□□□ 0.66
NFX1Q12986 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.2■□□□□ 0.66
NFX1Q12986 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 AC006504.4-201ENST00000592118 1568 ntBASIC19.2■□□□□ 0.66
NFX1Q12986 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.2■□□□□ 0.66
NFX1Q12986 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.2■□□□□ 0.66
NFX1Q12986 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.2■□□□□ 0.66
NFX1Q12986 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 AC003669.1-201ENST00000334569 611 ntBASIC19.2■□□□□ 0.66
NFX1Q12986 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.2■□□□□ 0.66
NFX1Q12986 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NFX1Q12986 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
NFX1Q12986 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.2■□□□□ 0.66
NFX1Q12986 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.2■□□□□ 0.66
NFX1Q12986 MIR3687-2-201ENST00000577708 61 ntBASIC19.2■□□□□ 0.66
NFX1Q12986 AC064836.3-201ENST00000607928 673 ntBASIC19.2■□□□□ 0.66
NFX1Q12986 MIR3687-1-201ENST00000614492 61 ntBASIC19.2■□□□□ 0.66
NFX1Q12986 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NFX1Q12986 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NFX1Q12986 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NFX1Q12986 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.2■□□□□ 0.66
NFX1Q12986 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.2■□□□□ 0.66
NFX1Q12986 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.2■□□□□ 0.66
NFX1Q12986 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
NFX1Q12986 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFX1Q12986 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms