Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP1Q04837 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SSBP1Q04837 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 AC092053.1-201ENST00000605787 1936 ntBASIC14.82□□□□□ -0.04
SSBP1Q04837 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.82□□□□□ -0.04
SSBP1Q04837 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SSBP1Q04837 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.82□□□□□ -0.04
SSBP1Q04837 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.82□□□□□ -0.04
SSBP1Q04837 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 AC002558.1-201ENST00000488906 803 ntBASIC14.82□□□□□ -0.04
SSBP1Q04837 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 RNA5SP413-201ENST00000516373 109 ntBASIC14.82□□□□□ -0.04
SSBP1Q04837 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SSBP1Q04837 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.82□□□□□ -0.04
SSBP1Q04837 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 LINC02199-201ENST00000506655 2702 ntBASIC14.82□□□□□ -0.04
SSBP1Q04837 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 AC007950.2-201ENST00000615045 2347 ntBASIC14.82□□□□□ -0.04
SSBP1Q04837 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP1Q04837 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP1Q04837 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
SSBP1Q04837 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.81□□□□□ -0.04
SSBP1Q04837 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SSBP1Q04837 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SSBP1Q04837 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.81□□□□□ -0.04
SSBP1Q04837 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 PVRIG2P-201ENST00000435460 978 ntBASIC14.81□□□□□ -0.04
SSBP1Q04837 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.81□□□□□ -0.04
SSBP1Q04837 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.81□□□□□ -0.04
SSBP1Q04837 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 AP005242.2-201ENST00000580065 1175 ntBASIC14.81□□□□□ -0.04
SSBP1Q04837 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SSBP1Q04837 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSBP1Q04837 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SSBP1Q04837 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 AL135905.2-201ENST00000584934 1404 ntBASIC14.81□□□□□ -0.04
SSBP1Q04837 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SSBP1Q04837 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.81□□□□□ -0.04
SSBP1Q04837 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSBP1Q04837 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP1Q04837 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.8□□□□□ -0.04
SSBP1Q04837 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.8□□□□□ -0.04
SSBP1Q04837 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.8□□□□□ -0.04
SSBP1Q04837 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP1Q04837 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP1Q04837 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SSBP1Q04837 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SSBP1Q04837 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
SSBP1Q04837 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.8□□□□□ -0.04
SSBP1Q04837 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SSBP1Q04837 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP1Q04837 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SSBP1Q04837 CRYGFP-201ENST00000418459 633 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms