Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RPS4XP62701 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RPS4XP62701 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.8■□□□□ 0.12
RPS4XP62701 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RPS4XP62701 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 DRAXINP1-201ENST00000437611 948 ntBASIC15.8■□□□□ 0.12
RPS4XP62701 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RPS4XP62701 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.8■□□□□ 0.12
RPS4XP62701 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.8■□□□□ 0.12
RPS4XP62701 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.8■□□□□ 0.12
RPS4XP62701 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.8■□□□□ 0.12
RPS4XP62701 AC090616.6-201ENST00000582640 721 ntBASIC15.8■□□□□ 0.12
RPS4XP62701 AL138831.2-201ENST00000606564 490 ntBASIC15.8■□□□□ 0.12
RPS4XP62701 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.8■□□□□ 0.12
RPS4XP62701 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RPS4XP62701 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
RPS4XP62701 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RPS4XP62701 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.8■□□□□ 0.12
RPS4XP62701 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.79■□□□□ 0.12
RPS4XP62701 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.79■□□□□ 0.12
RPS4XP62701 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RPS4XP62701 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.79■□□□□ 0.12
RPS4XP62701 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RPS4XP62701 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.79■□□□□ 0.12
RPS4XP62701 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.79■□□□□ 0.12
RPS4XP62701 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 MYCLP1-201ENST00000372451 1075 ntBASIC15.79■□□□□ 0.12
RPS4XP62701 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.79■□□□□ 0.12
RPS4XP62701 AC246785.2-201ENST00000432512 513 ntBASIC15.79■□□□□ 0.12
RPS4XP62701 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
RPS4XP62701 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.79■□□□□ 0.12
RPS4XP62701 TPSP2-201ENST00000561760 610 ntBASIC15.79■□□□□ 0.12
RPS4XP62701 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.79■□□□□ 0.12
RPS4XP62701 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.79■□□□□ 0.12
RPS4XP62701 AC005336.2-201ENST00000593183 939 ntBASIC15.79■□□□□ 0.12
RPS4XP62701 IFNL4P1-201ENST00000607083 540 ntBASIC15.79■□□□□ 0.12
RPS4XP62701 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.79■□□□□ 0.12
RPS4XP62701 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4XP62701 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4XP62701 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4XP62701 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.78■□□□□ 0.12
RPS4XP62701 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.78■□□□□ 0.12
RPS4XP62701 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4XP62701 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RPS4XP62701 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.78■□□□□ 0.12
RPS4XP62701 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.78■□□□□ 0.12
RPS4XP62701 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RPS4XP62701 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4XP62701 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.78■□□□□ 0.12
RPS4XP62701 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4XP62701 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4XP62701 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.78■□□□□ 0.12
RPS4XP62701 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.78■□□□□ 0.12
RPS4XP62701 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4XP62701 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4XP62701 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4XP62701 SLC25A1P3-201ENST00000395415 828 ntBASIC15.78■□□□□ 0.12
RPS4XP62701 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.78■□□□□ 0.12
RPS4XP62701 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.78■□□□□ 0.12
RPS4XP62701 TOB2P1-201ENST00000469761 992 ntBASIC15.78■□□□□ 0.12
RPS4XP62701 AC122714.2-201ENST00000502787 707 ntBASIC15.78■□□□□ 0.12
RPS4XP62701 AC091304.2-201ENST00000564639 760 ntBASIC15.78■□□□□ 0.12
RPS4XP62701 AC012615.1-201ENST00000565797 1299 ntBASIC15.78■□□□□ 0.12
RPS4XP62701 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RPS4XP62701 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RPS4XP62701 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms