Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
RHBDL3P58872 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RHBDL3P58872 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RHBDL3P58872 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.57■□□□□ 0.88
RHBDL3P58872 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.57■□□□□ 0.88
RHBDL3P58872 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RHBDL3P58872 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.57■□□□□ 0.88
RHBDL3P58872 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.57■□□□□ 0.88
RHBDL3P58872 ACTL9-202ENST00000612068 1252 ntBASIC20.57■□□□□ 0.88
RHBDL3P58872 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.57■□□□□ 0.88
RHBDL3P58872 AC079781.4-201ENST00000641908 219 ntBASIC20.57■□□□□ 0.88
RHBDL3P58872 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
RHBDL3P58872 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHBDL3P58872 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHBDL3P58872 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RHBDL3P58872 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHBDL3P58872 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.57■□□□□ 0.88
RHBDL3P58872 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RHBDL3P58872 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
RHBDL3P58872 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RHBDL3P58872 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDL3P58872 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RHBDL3P58872 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDL3P58872 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.56■□□□□ 0.88
RHBDL3P58872 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RHBDL3P58872 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RHBDL3P58872 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDL3P58872 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RHBDL3P58872 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.56■□□□□ 0.88
RHBDL3P58872 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.56■□□□□ 0.88
RHBDL3P58872 AL031432.2-201ENST00000566714 459 ntBASIC20.56■□□□□ 0.88
RHBDL3P58872 AL928711.1-201ENST00000570165 459 ntBASIC20.56■□□□□ 0.88
RHBDL3P58872 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.56■□□□□ 0.88
RHBDL3P58872 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDL3P58872 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDL3P58872 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RHBDL3P58872 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDL3P58872 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.56■□□□□ 0.88
RHBDL3P58872 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.56■□□□□ 0.88
RHBDL3P58872 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.56■□□□□ 0.88
RHBDL3P58872 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDL3P58872 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
RHBDL3P58872 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
RHBDL3P58872 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 ELL2P1-201ENST00000413990 1906 ntBASIC20.55■□□□□ 0.88
RHBDL3P58872 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.55■□□□□ 0.88
RHBDL3P58872 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.55■□□□□ 0.88
RHBDL3P58872 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RHBDL3P58872 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.55■□□□□ 0.88
RHBDL3P58872 PMS2P2-201ENST00000425039 1128 ntBASIC20.55■□□□□ 0.88
RHBDL3P58872 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RHBDL3P58872 AC087163.2-201ENST00000457299 853 ntBASIC20.55■□□□□ 0.88
RHBDL3P58872 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.55■□□□□ 0.88
RHBDL3P58872 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
RHBDL3P58872 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.55■□□□□ 0.88
RHBDL3P58872 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.55■□□□□ 0.88
RHBDL3P58872 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.55■□□□□ 0.88
RHBDL3P58872 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.55■□□□□ 0.88
RHBDL3P58872 AC023141.13-201ENST00000604991 943 ntBASIC20.55■□□□□ 0.88
RHBDL3P58872 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RHBDL3P58872 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.55■□□□□ 0.88
RHBDL3P58872 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDL3P58872 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.55■□□□□ 0.88
RHBDL3P58872 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDL3P58872 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDL3P58872 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDL3P58872 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDL3P58872 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.54■□□□□ 0.88
RHBDL3P58872 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.54■□□□□ 0.88
RHBDL3P58872 AC074386.1-202ENST00000463561 864 ntBASIC20.54■□□□□ 0.88
RHBDL3P58872 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.54■□□□□ 0.88
RHBDL3P58872 AL596442.2-201ENST00000610240 980 ntBASIC20.54■□□□□ 0.88
RHBDL3P58872 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDL3P58872 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.54■□□□□ 0.88
RHBDL3P58872 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDL3P58872 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RHBDL3P58872 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDL3P58872 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDL3P58872 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDL3P58872 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.54■□□□□ 0.88
RHBDL3P58872 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDL3P58872 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.54■□□□□ 0.88
RHBDL3P58872 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.53■□□□□ 0.88
RHBDL3P58872 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RHBDL3P58872 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RHBDL3P58872 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHBDL3P58872 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RHBDL3P58872 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.53■□□□□ 0.88
RHBDL3P58872 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RHBDL3P58872 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms