Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.83■□□□□ 0.12
SUMO3P55854 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.83■□□□□ 0.12
SUMO3P55854 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.83■□□□□ 0.12
SUMO3P55854 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.83■□□□□ 0.12
SUMO3P55854 AC008608.2-201ENST00000606089 416 ntBASIC15.83■□□□□ 0.12
SUMO3P55854 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SUMO3P55854 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.83■□□□□ 0.12
SUMO3P55854 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SUMO3P55854 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.83■□□□□ 0.12
SUMO3P55854 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SUMO3P55854 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.83■□□□□ 0.12
SUMO3P55854 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.83■□□□□ 0.12
SUMO3P55854 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.83■□□□□ 0.12
SUMO3P55854 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.83■□□□□ 0.12
SUMO3P55854 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SUMO3P55854 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SUMO3P55854 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SUMO3P55854 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SUMO3P55854 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 AL356309.3-201ENST00000624132 1934 ntBASIC15.82■□□□□ 0.12
SUMO3P55854 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SUMO3P55854 ACTG1P4-201ENST00000425123 1122 ntBASIC15.82■□□□□ 0.12
SUMO3P55854 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.82■□□□□ 0.12
SUMO3P55854 SCARNA2-201ENST00000458748 420 ntBASIC15.82■□□□□ 0.12
SUMO3P55854 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.82■□□□□ 0.12
SUMO3P55854 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.82■□□□□ 0.12
SUMO3P55854 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.82■□□□□ 0.12
SUMO3P55854 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.82■□□□□ 0.12
SUMO3P55854 MTDHP3-201ENST00000594186 672 ntBASIC15.82■□□□□ 0.12
SUMO3P55854 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.82■□□□□ 0.12
SUMO3P55854 AL022326.1-202ENST00000641533 845 ntBASIC15.82■□□□□ 0.12
SUMO3P55854 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
SUMO3P55854 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.82■□□□□ 0.12
SUMO3P55854 CROCCP2-202ENST00000412962 2773 ntBASIC15.82■□□□□ 0.12
SUMO3P55854 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 AL135999.2-201ENST00000622438 1686 ntBASIC15.82■□□□□ 0.12
SUMO3P55854 AC116353.5-201ENST00000638148 1699 ntBASIC15.82■□□□□ 0.12
SUMO3P55854 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SUMO3P55854 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.82■□□□□ 0.12
SUMO3P55854 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SUMO3P55854 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SUMO3P55854 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 AKR1C7P-201ENST00000305623 895 ntBASIC15.81■□□□□ 0.12
SUMO3P55854 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SUMO3P55854 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
SUMO3P55854 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.81■□□□□ 0.12
SUMO3P55854 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.81■□□□□ 0.12
SUMO3P55854 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 LETM1P2-201ENST00000597330 2178 ntBASIC15.81■□□□□ 0.12
SUMO3P55854 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SUMO3P55854 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.81■□□□□ 0.12
SUMO3P55854 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SUMO3P55854 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.8■□□□□ 0.12
SUMO3P55854 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SUMO3P55854 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms