Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHB3P54753 AC004967.1-201ENST00000453589 447 ntBASIC18.22■□□□□ 0.51
EPHB3P54753 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.22■□□□□ 0.51
EPHB3P54753 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
EPHB3P54753 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.22■□□□□ 0.51
EPHB3P54753 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
EPHB3P54753 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB3P54753 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB3P54753 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHB3P54753 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB3P54753 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB3P54753 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB3P54753 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHB3P54753 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
EPHB3P54753 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB3P54753 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHB3P54753 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHB3P54753 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB3P54753 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB3P54753 REXO1L11P-201ENST00000620964 1927 ntBASIC18.21■□□□□ 0.51
EPHB3P54753 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
EPHB3P54753 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHB3P54753 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
EPHB3P54753 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.21■□□□□ 0.51
EPHB3P54753 PI4KAP1-204ENST00000612579 1703 ntBASIC18.21■□□□□ 0.51
EPHB3P54753 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
EPHB3P54753 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHB3P54753 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
EPHB3P54753 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
EPHB3P54753 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.21■□□□□ 0.51
EPHB3P54753 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHB3P54753 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.21■□□□□ 0.51
EPHB3P54753 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHB3P54753 LINC01451-201ENST00000623792 534 ntBASIC18.21■□□□□ 0.51
EPHB3P54753 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHB3P54753 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB3P54753 RNF165-205ENST00000588679 2904 ntBASIC18.21■□□□□ 0.51
EPHB3P54753 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
EPHB3P54753 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.2■□□□□ 0.5
EPHB3P54753 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.2■□□□□ 0.5
EPHB3P54753 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.2■□□□□ 0.5
EPHB3P54753 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
EPHB3P54753 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
EPHB3P54753 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
EPHB3P54753 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.2■□□□□ 0.5
EPHB3P54753 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.2■□□□□ 0.5
EPHB3P54753 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.2■□□□□ 0.5
EPHB3P54753 AC134684.3-201ENST00000641758 218 ntBASIC18.2■□□□□ 0.5
EPHB3P54753 AC092865.6-201ENST00000642101 219 ntBASIC18.2■□□□□ 0.5
EPHB3P54753 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
EPHB3P54753 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 BICD1-207ENST00000551848 1962 ntBASIC18.2■□□□□ 0.5
EPHB3P54753 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
EPHB3P54753 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.2■□□□□ 0.5
EPHB3P54753 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
EPHB3P54753 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.2■□□□□ 0.5
EPHB3P54753 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
EPHB3P54753 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.2■□□□□ 0.5
EPHB3P54753 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB3P54753 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
EPHB3P54753 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB3P54753 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB3P54753 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
EPHB3P54753 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.19■□□□□ 0.5
EPHB3P54753 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.19■□□□□ 0.5
EPHB3P54753 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms