Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.57■■□□□ 1.04
NUP98P52948 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.57■■□□□ 1.04
NUP98P52948 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.57■■□□□ 1.04
NUP98P52948 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NUP98P52948 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.57■■□□□ 1.04
NUP98P52948 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.57■■□□□ 1.04
NUP98P52948 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NUP98P52948 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
NUP98P52948 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NUP98P52948 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NUP98P52948 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NUP98P52948 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.57■■□□□ 1.04
NUP98P52948 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.57■■□□□ 1.04
NUP98P52948 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.57■■□□□ 1.04
NUP98P52948 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.57■■□□□ 1.04
NUP98P52948 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.57■■□□□ 1.04
NUP98P52948 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.57■■□□□ 1.04
NUP98P52948 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.57■■□□□ 1.04
NUP98P52948 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.57■■□□□ 1.04
NUP98P52948 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.57■■□□□ 1.04
NUP98P52948 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.56■■□□□ 1.04
NUP98P52948 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NUP98P52948 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUP98P52948 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NUP98P52948 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUP98P52948 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUP98P52948 TIMM8BP1-201ENST00000452384 211 ntBASIC21.56■■□□□ 1.04
NUP98P52948 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.56■■□□□ 1.04
NUP98P52948 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NUP98P52948 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
NUP98P52948 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUP98P52948 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUP98P52948 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
NUP98P52948 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.56■■□□□ 1.04
NUP98P52948 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
NUP98P52948 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.55■■□□□ 1.04
NUP98P52948 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.55■■□□□ 1.04
NUP98P52948 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.55■■□□□ 1.04
NUP98P52948 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.55■■□□□ 1.04
NUP98P52948 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.55■■□□□ 1.04
NUP98P52948 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NUP98P52948 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
NUP98P52948 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.55■■□□□ 1.04
NUP98P52948 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 AL355306.1-201ENST00000415580 579 ntBASIC21.55■■□□□ 1.04
NUP98P52948 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.55■■□□□ 1.04
NUP98P52948 Z92544.3-201ENST00000624747 417 ntBASIC21.55■■□□□ 1.04
NUP98P52948 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUP98P52948 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
NUP98P52948 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP98P52948 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.54■■□□□ 1.04
NUP98P52948 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP98P52948 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.54■■□□□ 1.04
NUP98P52948 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP98P52948 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NUP98P52948 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.54■■□□□ 1.04
NUP98P52948 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.54■■□□□ 1.04
NUP98P52948 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.54■■□□□ 1.04
NUP98P52948 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NUP98P52948 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
NUP98P52948 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
NUP98P52948 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUP98P52948 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.54■■□□□ 1.04
NUP98P52948 AL009183.1-201ENST00000603760 355 ntBASIC21.54■■□□□ 1.04
NUP98P52948 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.54■■□□□ 1.04
NUP98P52948 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP98P52948 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.54■■□□□ 1.04
NUP98P52948 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
NUP98P52948 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP98P52948 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP98P52948 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.53■■□□□ 1.04
NUP98P52948 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
NUP98P52948 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP98P52948 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms