Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TNFSF9P41273 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 AP002414.3-201ENST00000589352 1468 ntBASIC18.9■□□□□ 0.62
TNFSF9P41273 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TNFSF9P41273 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFSF9P41273 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TNFSF9P41273 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFSF9P41273 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFSF9P41273 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.9■□□□□ 0.62
TNFSF9P41273 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.9■□□□□ 0.62
TNFSF9P41273 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TNFSF9P41273 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.9■□□□□ 0.62
TNFSF9P41273 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFSF9P41273 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFSF9P41273 AC116407.3-201ENST00000623905 1129 ntBASIC18.9■□□□□ 0.62
TNFSF9P41273 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 PP12613-201ENST00000424958 2230 ntBASIC18.9■□□□□ 0.62
TNFSF9P41273 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.9■□□□□ 0.62
TNFSF9P41273 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.9■□□□□ 0.62
TNFSF9P41273 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF9P41273 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TNFSF9P41273 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.89■□□□□ 0.61
TNFSF9P41273 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 LAGE3P1-201ENST00000425356 484 ntBASIC18.89■□□□□ 0.61
TNFSF9P41273 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.89■□□□□ 0.61
TNFSF9P41273 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TNFSF9P41273 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.89■□□□□ 0.61
TNFSF9P41273 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TNFSF9P41273 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
TNFSF9P41273 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.89■□□□□ 0.61
TNFSF9P41273 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFSF9P41273 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFSF9P41273 AC008735.5-201ENST00000623544 497 ntBASIC18.89■□□□□ 0.61
TNFSF9P41273 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.89■□□□□ 0.61
TNFSF9P41273 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.89■□□□□ 0.61
TNFSF9P41273 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TNFSF9P41273 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF9P41273 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFSF9P41273 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFSF9P41273 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TNFSF9P41273 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.88■□□□□ 0.61
TNFSF9P41273 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.88■□□□□ 0.61
TNFSF9P41273 AP000347.1-202ENST00000435868 847 ntBASIC18.88■□□□□ 0.61
TNFSF9P41273 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFSF9P41273 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.88■□□□□ 0.61
TNFSF9P41273 AC139887.3-201ENST00000568585 713 ntBASIC18.88■□□□□ 0.61
TNFSF9P41273 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.88■□□□□ 0.61
TNFSF9P41273 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TNFSF9P41273 AL589182.2-201ENST00000619332 1049 ntBASIC18.88■□□□□ 0.61
TNFSF9P41273 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.88■□□□□ 0.61
TNFSF9P41273 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFSF9P41273 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
TNFSF9P41273 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNFSF9P41273 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF9P41273 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TNFSF9P41273 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TNFSF9P41273 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF9P41273 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.87■□□□□ 0.61
TNFSF9P41273 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.87■□□□□ 0.61
TNFSF9P41273 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF9P41273 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms