Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
KRT9P35527 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT9P35527 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT9P35527 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 BX276092.7-203ENST00000637198 1536 ntBASIC19.16■□□□□ 0.66
KRT9P35527 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT9P35527 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT9P35527 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.16■□□□□ 0.66
KRT9P35527 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.16■□□□□ 0.66
KRT9P35527 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT9P35527 AC004263.2-201ENST00000617183 678 ntBASIC19.16■□□□□ 0.66
KRT9P35527 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
KRT9P35527 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT9P35527 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
KRT9P35527 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT9P35527 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT9P35527 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT9P35527 UBALD1-205ENST00000590891 2641 ntBASIC19.16■□□□□ 0.66
KRT9P35527 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
KRT9P35527 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT9P35527 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT9P35527 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT9P35527 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT9P35527 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
KRT9P35527 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT9P35527 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KRT9P35527 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT9P35527 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT9P35527 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT9P35527 AC005104.2-201ENST00000427818 678 ntBASIC19.15■□□□□ 0.66
KRT9P35527 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT9P35527 AL671277.2-201ENST00000458060 996 ntBASIC19.15■□□□□ 0.66
KRT9P35527 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.15■□□□□ 0.66
KRT9P35527 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.15■□□□□ 0.66
KRT9P35527 VENTXP5-201ENST00000523979 775 ntBASIC19.15■□□□□ 0.66
KRT9P35527 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.15■□□□□ 0.66
KRT9P35527 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
KRT9P35527 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT9P35527 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.15■□□□□ 0.66
KRT9P35527 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT9P35527 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT9P35527 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT9P35527 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KRT9P35527 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KRT9P35527 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT9P35527 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.66
KRT9P35527 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT9P35527 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
KRT9P35527 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
KRT9P35527 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT9P35527 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT9P35527 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT9P35527 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 IGHGP-201ENST00000390555 1178 ntBASIC19.14■□□□□ 0.65
KRT9P35527 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
KRT9P35527 AC112698.1-201ENST00000510299 916 ntBASIC19.14■□□□□ 0.65
KRT9P35527 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT9P35527 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.14■□□□□ 0.65
KRT9P35527 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT9P35527 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.14■□□□□ 0.65
KRT9P35527 AC009154.2-201ENST00000621177 724 ntBASIC19.14■□□□□ 0.65
KRT9P35527 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT9P35527 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.14■□□□□ 0.65
KRT9P35527 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT9P35527 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT9P35527 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
KRT9P35527 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
KRT9P35527 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
KRT9P35527 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
KRT9P35527 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms