Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNNA1P35221 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.5■□□□□ 0.55
CTNNA1P35221 BX664615.1-201ENST00000443558 458 ntBASIC18.5■□□□□ 0.55
CTNNA1P35221 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.5■□□□□ 0.55
CTNNA1P35221 AP003733.1-201ENST00000491725 852 ntBASIC18.5■□□□□ 0.55
CTNNA1P35221 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.5■□□□□ 0.55
CTNNA1P35221 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.5■□□□□ 0.55
CTNNA1P35221 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.5■□□□□ 0.55
CTNNA1P35221 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.5■□□□□ 0.55
CTNNA1P35221 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.5■□□□□ 0.55
CTNNA1P35221 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNNA1P35221 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNNA1P35221 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CTNNA1P35221 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNNA1P35221 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CTNNA1P35221 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.5■□□□□ 0.55
CTNNA1P35221 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.5■□□□□ 0.55
CTNNA1P35221 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.5■□□□□ 0.55
CTNNA1P35221 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNNA1P35221 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNNA1P35221 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNNA1P35221 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.5■□□□□ 0.55
CTNNA1P35221 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CTNNA1P35221 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNNA1P35221 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.49■□□□□ 0.55
CTNNA1P35221 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.49■□□□□ 0.55
CTNNA1P35221 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.49■□□□□ 0.55
CTNNA1P35221 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
CTNNA1P35221 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 TERF1P1-201ENST00000311003 1181 ntBASIC18.49■□□□□ 0.55
CTNNA1P35221 MTCL1P1-201ENST00000446207 792 ntBASIC18.49■□□□□ 0.55
CTNNA1P35221 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.49■□□□□ 0.55
CTNNA1P35221 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.49■□□□□ 0.55
CTNNA1P35221 GPR32P1-201ENST00000601788 811 ntBASIC18.49■□□□□ 0.55
CTNNA1P35221 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.49■□□□□ 0.55
CTNNA1P35221 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CTNNA1P35221 AC008894.3-201ENST00000624324 3103 ntBASIC18.49■□□□□ 0.55
CTNNA1P35221 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CTNNA1P35221 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.49■□□□□ 0.55
CTNNA1P35221 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNNA1P35221 LINC01311-201ENST00000565162 1445 ntBASIC18.49■□□□□ 0.55
CTNNA1P35221 AC073508.3-201ENST00000619697 1419 ntBASIC18.49■□□□□ 0.55
CTNNA1P35221 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CTNNA1P35221 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CTNNA1P35221 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.48■□□□□ 0.55
CTNNA1P35221 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.48■□□□□ 0.55
CTNNA1P35221 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.48■□□□□ 0.55
CTNNA1P35221 AC117947.1-201ENST00000427448 529 ntBASIC18.48■□□□□ 0.55
CTNNA1P35221 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.48■□□□□ 0.55
CTNNA1P35221 AC068472.1-201ENST00000474589 881 ntBASIC18.48■□□□□ 0.55
CTNNA1P35221 ZNF444P1-201ENST00000559497 298 ntBASIC18.48■□□□□ 0.55
CTNNA1P35221 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.48■□□□□ 0.55
CTNNA1P35221 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.48■□□□□ 0.55
CTNNA1P35221 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.48■□□□□ 0.55
CTNNA1P35221 AC066615.1-201ENST00000640911 628 ntBASIC18.48■□□□□ 0.55
CTNNA1P35221 AC097493.4-201ENST00000641197 219 ntBASIC18.48■□□□□ 0.55
CTNNA1P35221 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.48■□□□□ 0.55
CTNNA1P35221 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CTNNA1P35221 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.48■□□□□ 0.55
CTNNA1P35221 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CTNNA1P35221 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CTNNA1P35221 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNNA1P35221 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTNNA1P35221 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CTNNA1P35221 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CTNNA1P35221 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms