Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 AL845331.1-201ENST00000424978 1190 ntBASIC18.66■□□□□ 0.58
FAM228BP0C875 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.66■□□□□ 0.58
FAM228BP0C875 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.66■□□□□ 0.58
FAM228BP0C875 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.66■□□□□ 0.58
FAM228BP0C875 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.66■□□□□ 0.58
FAM228BP0C875 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.66■□□□□ 0.58
FAM228BP0C875 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 AC109462.3-201ENST00000573934 613 ntBASIC18.66■□□□□ 0.58
FAM228BP0C875 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.66■□□□□ 0.58
FAM228BP0C875 AL353801.3-201ENST00000609898 542 ntBASIC18.66■□□□□ 0.58
FAM228BP0C875 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.66■□□□□ 0.58
FAM228BP0C875 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FAM228BP0C875 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.66■□□□□ 0.58
FAM228BP0C875 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.66■□□□□ 0.58
FAM228BP0C875 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
FAM228BP0C875 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.66■□□□□ 0.58
FAM228BP0C875 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.66■□□□□ 0.58
FAM228BP0C875 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.66■□□□□ 0.58
FAM228BP0C875 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.66■□□□□ 0.58
FAM228BP0C875 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 AC125634.1-201ENST00000438758 1403 ntBASIC18.66■□□□□ 0.58
FAM228BP0C875 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
FAM228BP0C875 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.65■□□□□ 0.58
FAM228BP0C875 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
FAM228BP0C875 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
FAM228BP0C875 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
FAM228BP0C875 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.65■□□□□ 0.58
FAM228BP0C875 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.65■□□□□ 0.58
FAM228BP0C875 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.65■□□□□ 0.58
FAM228BP0C875 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.65■□□□□ 0.58
FAM228BP0C875 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.65■□□□□ 0.58
FAM228BP0C875 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.65■□□□□ 0.58
FAM228BP0C875 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.65■□□□□ 0.58
FAM228BP0C875 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
FAM228BP0C875 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM228BP0C875 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FAM228BP0C875 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
FAM228BP0C875 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.64■□□□□ 0.57
FAM228BP0C875 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
FAM228BP0C875 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.64■□□□□ 0.57
FAM228BP0C875 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 PCDHA14-201ENST00000506751 2298 ntBASIC18.64■□□□□ 0.57
FAM228BP0C875 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.64■□□□□ 0.57
FAM228BP0C875 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
FAM228BP0C875 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
FAM228BP0C875 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 AL645929.1-201ENST00000420084 975 ntBASIC18.64■□□□□ 0.57
FAM228BP0C875 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.64■□□□□ 0.57
FAM228BP0C875 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.64■□□□□ 0.57
FAM228BP0C875 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.64■□□□□ 0.57
FAM228BP0C875 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.64■□□□□ 0.57
FAM228BP0C875 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.64■□□□□ 0.57
FAM228BP0C875 AC005336.2-201ENST00000593183 939 ntBASIC18.64■□□□□ 0.57
FAM228BP0C875 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.64■□□□□ 0.57
FAM228BP0C875 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
FAM228BP0C875 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
FAM228BP0C875 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM228BP0C875 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FAM228BP0C875 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms