Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 AC211429.1-201ENST00000415277 523 ntBASIC18.96■□□□□ 0.63
CCDC172P0C7W6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC172P0C7W6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 HYMAI.1-201ENST00000620949 238 ntBASIC18.95■□□□□ 0.62
CCDC172P0C7W6 AC006011.2-201ENST00000621313 1158 ntBASIC18.95■□□□□ 0.62
CCDC172P0C7W6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC172P0C7W6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 Z83836.1-201ENST00000624605 1642 ntBASIC18.94■□□□□ 0.62
CCDC172P0C7W6 AP001094.4-201ENST00000579008 2176 ntBASIC18.94■□□□□ 0.62
CCDC172P0C7W6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 GUSBP12-201ENST00000513727 720 ntBASIC18.94■□□□□ 0.62
CCDC172P0C7W6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC172P0C7W6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC172P0C7W6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms