Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ZNF253O75346 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF253O75346 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF253O75346 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 AC126755.1-201ENST00000525846 6405 ntBASIC13.68□□□□□ -0.22
ZNF253O75346 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF253O75346 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF253O75346 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF253O75346 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
ZNF253O75346 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF253O75346 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
ZNF253O75346 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF253O75346 GCSHP5-201ENST00000443090 522 ntBASIC13.68□□□□□ -0.22
ZNF253O75346 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF253O75346 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF253O75346 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ZNF253O75346 AP003071.4-201ENST00000562276 1284 ntBASIC13.68□□□□□ -0.22
ZNF253O75346 C2orf69P3-201ENST00000565542 1120 ntBASIC13.68□□□□□ -0.22
ZNF253O75346 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF253O75346 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF253O75346 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ZNF253O75346 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF253O75346 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ZNF253O75346 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
ZNF253O75346 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF253O75346 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ZNF253O75346 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF253O75346 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.67□□□□□ -0.22
ZNF253O75346 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
ZNF253O75346 PRORSD1P-201ENST00000295112 541 ntBASIC13.67□□□□□ -0.22
ZNF253O75346 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF253O75346 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF253O75346 AC007663.1-201ENST00000438948 1240 ntBASIC13.67□□□□□ -0.22
ZNF253O75346 RBM17P1-201ENST00000453646 1190 ntBASIC13.67□□□□□ -0.22
ZNF253O75346 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 FITM1-202ENST00000559294 800 ntBASIC13.67□□□□□ -0.22
ZNF253O75346 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF253O75346 AL512604.3-201ENST00000569583 964 ntBASIC13.67□□□□□ -0.22
ZNF253O75346 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF253O75346 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF253O75346 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ZNF253O75346 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
ZNF253O75346 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF253O75346 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms