Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF40O75150 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF40O75150 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF40O75150 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF40O75150 AP000347.1-202ENST00000435868 847 ntBASIC18.93■□□□□ 0.62
RNF40O75150 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF40O75150 FOSL1P1-201ENST00000511041 816 ntBASIC18.93■□□□□ 0.62
RNF40O75150 AC091304.2-201ENST00000564639 760 ntBASIC18.93■□□□□ 0.62
RNF40O75150 AL031008.1-201ENST00000619963 541 ntBASIC18.93■□□□□ 0.62
RNF40O75150 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF40O75150 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF40O75150 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF40O75150 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF40O75150 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
RNF40O75150 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
RNF40O75150 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF40O75150 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF40O75150 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
RNF40O75150 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF40O75150 AC112777.1-201ENST00000540175 1423 ntBASIC18.92■□□□□ 0.62
RNF40O75150 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF40O75150 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF40O75150 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RNF40O75150 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF40O75150 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF40O75150 AC009078.2-202ENST00000463353 338 ntBASIC18.92■□□□□ 0.62
RNF40O75150 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF40O75150 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 AC012615.1-201ENST00000565797 1299 ntBASIC18.92■□□□□ 0.62
RNF40O75150 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF40O75150 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RNF40O75150 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 PCDHB19P-201ENST00000570871 2371 ntBASIC18.92■□□□□ 0.62
RNF40O75150 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF40O75150 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RNF40O75150 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF40O75150 HOXB1-202ENST00000577092 1414 ntBASIC18.91■□□□□ 0.62
RNF40O75150 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RNF40O75150 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF40O75150 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF40O75150 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RNF40O75150 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF40O75150 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF40O75150 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF40O75150 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF40O75150 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF40O75150 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RNF40O75150 AC005332.3-201ENST00000589904 676 ntBASIC18.91■□□□□ 0.62
RNF40O75150 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF40O75150 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.91■□□□□ 0.62
RNF40O75150 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF40O75150 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF40O75150 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF40O75150 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF40O75150 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF40O75150 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF40O75150 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RNF40O75150 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF40O75150 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF40O75150 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms