Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EXTL3O43909 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
EXTL3O43909 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EXTL3O43909 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EXTL3O43909 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EXTL3O43909 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
EXTL3O43909 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EXTL3O43909 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
EXTL3O43909 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
EXTL3O43909 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.96■□□□□ 0.63
EXTL3O43909 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.96■□□□□ 0.63
EXTL3O43909 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
EXTL3O43909 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
EXTL3O43909 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
EXTL3O43909 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.96■□□□□ 0.63
EXTL3O43909 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
EXTL3O43909 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.96■□□□□ 0.63
EXTL3O43909 AC004817.3-201ENST00000602957 2129 ntBASIC18.96■□□□□ 0.63
EXTL3O43909 AC104692.2-201ENST00000603054 253 ntBASIC18.96■□□□□ 0.63
EXTL3O43909 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
EXTL3O43909 AL022326.1-202ENST00000641533 845 ntBASIC18.96■□□□□ 0.63
EXTL3O43909 AC090340.1-201ENST00000620778 4980 ntBASIC18.96■□□□□ 0.63
EXTL3O43909 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
EXTL3O43909 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.96■□□□□ 0.63
EXTL3O43909 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
EXTL3O43909 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 PP12613-201ENST00000424958 2230 ntBASIC18.96■□□□□ 0.63
EXTL3O43909 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXTL3O43909 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
EXTL3O43909 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.95■□□□□ 0.62
EXTL3O43909 AC016396.2-201ENST00000562575 1417 ntBASIC18.95■□□□□ 0.62
EXTL3O43909 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.95■□□□□ 0.62
EXTL3O43909 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.95■□□□□ 0.62
EXTL3O43909 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.95■□□□□ 0.62
EXTL3O43909 AC079781.3-201ENST00000449110 356 ntBASIC18.95■□□□□ 0.62
EXTL3O43909 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.95■□□□□ 0.62
EXTL3O43909 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.95■□□□□ 0.62
EXTL3O43909 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
EXTL3O43909 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
EXTL3O43909 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
EXTL3O43909 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXTL3O43909 AL135999.2-201ENST00000622438 1686 ntBASIC18.95■□□□□ 0.62
EXTL3O43909 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.95■□□□□ 0.62
EXTL3O43909 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.94■□□□□ 0.62
EXTL3O43909 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.94■□□□□ 0.62
EXTL3O43909 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.94■□□□□ 0.62
EXTL3O43909 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.94■□□□□ 0.62
EXTL3O43909 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
EXTL3O43909 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.94■□□□□ 0.62
EXTL3O43909 TP73-AS1-207ENST00000624167 988 ntBASIC18.94■□□□□ 0.62
EXTL3O43909 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
EXTL3O43909 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.94■□□□□ 0.62
EXTL3O43909 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms