Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.79■□□□□ 0.28
PRICKLE3O43900 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRICKLE3O43900 KRT18P67-201ENST00000432816 1264 ntBASIC16.79■□□□□ 0.28
PRICKLE3O43900 HNRNPDP1-201ENST00000439535 754 ntBASIC16.79■□□□□ 0.28
PRICKLE3O43900 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.79■□□□□ 0.28
PRICKLE3O43900 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRICKLE3O43900 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRICKLE3O43900 RNA5SP419-201ENST00000515908 135 ntBASIC16.79■□□□□ 0.28
PRICKLE3O43900 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.79■□□□□ 0.28
PRICKLE3O43900 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.79■□□□□ 0.28
PRICKLE3O43900 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.79■□□□□ 0.28
PRICKLE3O43900 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.79■□□□□ 0.28
PRICKLE3O43900 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.79■□□□□ 0.28
PRICKLE3O43900 AC148477.8-201ENST00000624298 468 ntBASIC16.79■□□□□ 0.28
PRICKLE3O43900 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.79■□□□□ 0.28
PRICKLE3O43900 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRICKLE3O43900 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRICKLE3O43900 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRICKLE3O43900 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRICKLE3O43900 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRICKLE3O43900 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.78■□□□□ 0.28
PRICKLE3O43900 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRICKLE3O43900 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRICKLE3O43900 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRICKLE3O43900 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRICKLE3O43900 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRICKLE3O43900 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRICKLE3O43900 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRICKLE3O43900 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRICKLE3O43900 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 AC073648.2-201ENST00000510116 352 ntBASIC16.77■□□□□ 0.28
PRICKLE3O43900 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PRICKLE3O43900 AL135999.2-201ENST00000622438 1686 ntBASIC16.77■□□□□ 0.28
PRICKLE3O43900 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRICKLE3O43900 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.77■□□□□ 0.27
PRICKLE3O43900 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PRICKLE3O43900 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms