Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LDB2O43679 AC073592.5-201ENST00000624854 528 ntBASIC17.49■□□□□ 0.39
LDB2O43679 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.49■□□□□ 0.39
LDB2O43679 AP000867.4-201ENST00000641616 219 ntBASIC17.49■□□□□ 0.39
LDB2O43679 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
LDB2O43679 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
LDB2O43679 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.48■□□□□ 0.39
LDB2O43679 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LDB2O43679 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LDB2O43679 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LDB2O43679 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 AC012313.1-201ENST00000593393 3059 ntBASIC17.48■□□□□ 0.39
LDB2O43679 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.48■□□□□ 0.39
LDB2O43679 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.48■□□□□ 0.39
LDB2O43679 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.48■□□□□ 0.39
LDB2O43679 NUS1P1-201ENST00000446295 882 ntBASIC17.48■□□□□ 0.39
LDB2O43679 KRT16P4-201ENST00000453883 522 ntBASIC17.48■□□□□ 0.39
LDB2O43679 FOSL1P1-201ENST00000511041 816 ntBASIC17.48■□□□□ 0.39
LDB2O43679 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.48■□□□□ 0.39
LDB2O43679 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.48■□□□□ 0.39
LDB2O43679 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.48■□□□□ 0.39
LDB2O43679 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.48■□□□□ 0.39
LDB2O43679 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.48■□□□□ 0.39
LDB2O43679 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.48■□□□□ 0.39
LDB2O43679 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LDB2O43679 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.48■□□□□ 0.39
LDB2O43679 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 AC080080.1-201ENST00000625121 2420 ntBASIC17.48■□□□□ 0.39
LDB2O43679 AC020916.1-201ENST00000587762 1774 ntBASIC17.48■□□□□ 0.39
LDB2O43679 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
LDB2O43679 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB2O43679 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.47■□□□□ 0.39
LDB2O43679 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LDB2O43679 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.47■□□□□ 0.39
LDB2O43679 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LDB2O43679 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 AC003669.1-201ENST00000334569 611 ntBASIC17.47■□□□□ 0.39
LDB2O43679 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.47■□□□□ 0.39
LDB2O43679 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.47■□□□□ 0.39
LDB2O43679 STK19B-204ENST00000512515 211 ntBASIC17.47■□□□□ 0.39
LDB2O43679 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.47■□□□□ 0.39
LDB2O43679 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.47■□□□□ 0.39
LDB2O43679 MIR3652-201ENST00000579335 131 ntBASIC17.47■□□□□ 0.39
LDB2O43679 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.47■□□□□ 0.39
LDB2O43679 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.47■□□□□ 0.39
LDB2O43679 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.47■□□□□ 0.39
LDB2O43679 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.47■□□□□ 0.39
LDB2O43679 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LDB2O43679 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.47■□□□□ 0.39
LDB2O43679 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.47■□□□□ 0.39
LDB2O43679 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDB2O43679 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.47■□□□□ 0.39
LDB2O43679 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LDB2O43679 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LDB2O43679 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.46■□□□□ 0.39
LDB2O43679 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LDB2O43679 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.46■□□□□ 0.39
LDB2O43679 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.46■□□□□ 0.39
LDB2O43679 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms