Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 AC138028.4-201ENST00000564984 1845 ntBASIC18.63■□□□□ 0.57
HOXA2O43364 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXA2O43364 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA2O43364 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA2O43364 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HOXA2O43364 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HOXA2O43364 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HOXA2O43364 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HOXA2O43364 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA2O43364 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXA2O43364 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
HOXA2O43364 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 PAWRP1-201ENST00000451083 565 ntBASIC18.62■□□□□ 0.57
HOXA2O43364 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 CYMP-203ENST00000474680 1263 ntBASIC18.62■□□□□ 0.57
HOXA2O43364 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXA2O43364 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA2O43364 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HOXA2O43364 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA2O43364 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HOXA2O43364 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA2O43364 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA2O43364 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HOXA2O43364 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA2O43364 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA2O43364 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA2O43364 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA2O43364 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HOXA2O43364 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
HOXA2O43364 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HOXA2O43364 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXA2O43364 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXA2O43364 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXA2O43364 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.61■□□□□ 0.57
HOXA2O43364 AC129492.6-201ENST00000611383 1305 ntBASIC18.61■□□□□ 0.57
HOXA2O43364 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXA2O43364 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.61■□□□□ 0.57
HOXA2O43364 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.61■□□□□ 0.57
HOXA2O43364 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXA2O43364 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.61■□□□□ 0.57
HOXA2O43364 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA2O43364 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXA2O43364 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HOXA2O43364 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.6■□□□□ 0.57
HOXA2O43364 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXA2O43364 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HOXA2O43364 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 AL513480.1-201ENST00000451731 511 ntBASIC18.6■□□□□ 0.57
HOXA2O43364 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.6■□□□□ 0.57
HOXA2O43364 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXA2O43364 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXA2O43364 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXA2O43364 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXA2O43364 AC004835.2-201ENST00000603762 682 ntBASIC18.6■□□□□ 0.57
HOXA2O43364 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXA2O43364 REXO1L3P-201ENST00000622202 1288 ntBASIC18.6■□□□□ 0.57
HOXA2O43364 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HOXA2O43364 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXA2O43364 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HOXA2O43364 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA2O43364 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms