Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 AC060834.1-201ENST00000443027 2032 ntBASIC17.43■□□□□ 0.38
PHGDHO43175 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PHGDHO43175 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PHGDHO43175 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PHGDHO43175 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.43■□□□□ 0.38
PHGDHO43175 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.43■□□□□ 0.38
PHGDHO43175 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.43■□□□□ 0.38
PHGDHO43175 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.43■□□□□ 0.38
PHGDHO43175 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.43■□□□□ 0.38
PHGDHO43175 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 AL139327.4-201ENST00000612362 153 ntBASIC17.43■□□□□ 0.38
PHGDHO43175 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.43■□□□□ 0.38
PHGDHO43175 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.43■□□□□ 0.38
PHGDHO43175 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.43■□□□□ 0.38
PHGDHO43175 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHGDHO43175 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.42■□□□□ 0.38
PHGDHO43175 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
PHGDHO43175 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
PHGDHO43175 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 AC016396.2-201ENST00000562575 1417 ntBASIC17.42■□□□□ 0.38
PHGDHO43175 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PHGDHO43175 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.42■□□□□ 0.38
PHGDHO43175 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.42■□□□□ 0.38
PHGDHO43175 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.42■□□□□ 0.38
PHGDHO43175 LINC01023-201ENST00000606054 436 ntBASIC17.42■□□□□ 0.38
PHGDHO43175 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PHGDHO43175 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PHGDHO43175 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.42■□□□□ 0.38
PHGDHO43175 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHGDHO43175 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PHGDHO43175 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.42■□□□□ 0.38
PHGDHO43175 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.42■□□□□ 0.38
PHGDHO43175 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.41■□□□□ 0.38
PHGDHO43175 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PHGDHO43175 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 OR6D1P-203ENST00000641209 4860 ntBASIC17.41■□□□□ 0.38
PHGDHO43175 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PHGDHO43175 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PHGDHO43175 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PHGDHO43175 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.41■□□□□ 0.38
PHGDHO43175 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 AC063952.2-201ENST00000498792 1227 ntBASIC17.41■□□□□ 0.38
PHGDHO43175 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.41■□□□□ 0.38
PHGDHO43175 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PHGDHO43175 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.41■□□□□ 0.38
PHGDHO43175 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PHGDHO43175 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHGDHO43175 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms