Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC027307.2-201ENST00000591252 911 ntBASIC18.75■□□□□ 0.59
TNRC18O15417 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNRC18O15417 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNRC18O15417 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.75■□□□□ 0.59
TNRC18O15417 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TNRC18O15417 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNRC18O15417 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNRC18O15417 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.75■□□□□ 0.59
TNRC18O15417 ACTG1P4-201ENST00000425123 1122 ntBASIC18.75■□□□□ 0.59
TNRC18O15417 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNRC18O15417 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.75■□□□□ 0.59
TNRC18O15417 ACTG1P17-201ENST00000558391 1119 ntBASIC18.75■□□□□ 0.59
TNRC18O15417 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TNRC18O15417 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNRC18O15417 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.75■□□□□ 0.59
TNRC18O15417 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.75■□□□□ 0.59
TNRC18O15417 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TNRC18O15417 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNRC18O15417 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
TNRC18O15417 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNRC18O15417 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNRC18O15417 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.75■□□□□ 0.59
TNRC18O15417 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.75■□□□□ 0.59
TNRC18O15417 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.75■□□□□ 0.59
TNRC18O15417 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.75■□□□□ 0.59
TNRC18O15417 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TNRC18O15417 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TNRC18O15417 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.74■□□□□ 0.59
TNRC18O15417 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TNRC18O15417 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TNRC18O15417 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TNRC18O15417 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TNRC18O15417 AC009336.1-201ENST00000608941 1553 ntBASIC18.74■□□□□ 0.59
TNRC18O15417 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.74■□□□□ 0.59
TNRC18O15417 CTBP2P5-201ENST00000454986 1264 ntBASIC18.74■□□□□ 0.59
TNRC18O15417 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.74■□□□□ 0.59
TNRC18O15417 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.74■□□□□ 0.59
TNRC18O15417 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TNRC18O15417 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TNRC18O15417 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.74■□□□□ 0.59
TNRC18O15417 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TNRC18O15417 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.74■□□□□ 0.59
TNRC18O15417 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TNRC18O15417 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.74■□□□□ 0.59
TNRC18O15417 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.74■□□□□ 0.59
TNRC18O15417 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.74■□□□□ 0.59
TNRC18O15417 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.74■□□□□ 0.59
TNRC18O15417 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNRC18O15417 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.73■□□□□ 0.59
TNRC18O15417 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.73■□□□□ 0.59
TNRC18O15417 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TNRC18O15417 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.73■□□□□ 0.59
TNRC18O15417 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.73■□□□□ 0.59
TNRC18O15417 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.73■□□□□ 0.59
TNRC18O15417 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TNRC18O15417 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.73■□□□□ 0.59
TNRC18O15417 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 RPL37AP1-201ENST00000412502 279 ntBASIC18.73■□□□□ 0.59
TNRC18O15417 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.73■□□□□ 0.59
TNRC18O15417 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 AC015936.2-201ENST00000593177 259 ntBASIC18.73■□□□□ 0.59
TNRC18O15417 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TNRC18O15417 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.73■□□□□ 0.59
TNRC18O15417 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TNRC18O15417 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.73■□□□□ 0.59
TNRC18O15417 AC141586.3-201ENST00000562166 1838 ntBASIC18.73■□□□□ 0.59
TNRC18O15417 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNRC18O15417 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNRC18O15417 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNRC18O15417 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNRC18O15417 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.72■□□□□ 0.59
TNRC18O15417 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.72■□□□□ 0.59
TNRC18O15417 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.72■□□□□ 0.59
TNRC18O15417 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNRC18O15417 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms