Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.72■□□□□ 0.27
PDLIM1O00151 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM1O00151 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PDLIM1O00151 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM1O00151 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM1O00151 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 LYSMD4-203ENST00000378904 2122 ntBASIC16.72■□□□□ 0.27
PDLIM1O00151 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
PDLIM1O00151 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 INGX-201ENST00000359239 846 ntBASIC16.71■□□□□ 0.27
PDLIM1O00151 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.71■□□□□ 0.27
PDLIM1O00151 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PDLIM1O00151 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 MCCD1P1-208ENST00000445732 328 ntBASIC16.71■□□□□ 0.27
PDLIM1O00151 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PDLIM1O00151 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PDLIM1O00151 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM1O00151 AL353719.1-201ENST00000566847 864 ntBASIC16.71■□□□□ 0.27
PDLIM1O00151 AC116562.4-202ENST00000641738 218 ntBASIC16.71■□□□□ 0.27
PDLIM1O00151 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 AC079328.2-201ENST00000561241 3354 ntBASIC16.71■□□□□ 0.27
PDLIM1O00151 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PDLIM1O00151 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM1O00151 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM1O00151 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PDLIM1O00151 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PDLIM1O00151 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
PDLIM1O00151 KRT18P22-201ENST00000402024 1347 ntBASIC16.7■□□□□ 0.26
PDLIM1O00151 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PDLIM1O00151 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM1O00151 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM1O00151 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PDLIM1O00151 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM1O00151 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM1O00151 CCR12P-201ENST00000446203 998 ntBASIC16.7■□□□□ 0.26
PDLIM1O00151 TSPY17P-201ENST00000450329 467 ntBASIC16.7■□□□□ 0.26
PDLIM1O00151 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.7■□□□□ 0.26
PDLIM1O00151 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.7■□□□□ 0.26
PDLIM1O00151 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM1O00151 FAM87A-204ENST00000613235 858 ntBASIC16.7■□□□□ 0.26
PDLIM1O00151 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.7■□□□□ 0.26
PDLIM1O00151 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM1O00151 AC105917.1-201ENST00000506637 2539 ntBASIC16.7■□□□□ 0.26
PDLIM1O00151 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PDLIM1O00151 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.7■□□□□ 0.26
PDLIM1O00151 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
PDLIM1O00151 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM1O00151 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PDLIM1O00151 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM1O00151 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM1O00151 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM1O00151 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDLIM1O00151 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM1O00151 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 AC060834.1-201ENST00000443027 2032 ntBASIC16.69■□□□□ 0.26
PDLIM1O00151 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM1O00151 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDLIM1O00151 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.69■□□□□ 0.26
PDLIM1O00151 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms