Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX39AO00148 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX39AO00148 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX39AO00148 RPS2P28-201ENST00000314255 741 ntBASIC19.69■□□□□ 0.74
DDX39AO00148 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX39AO00148 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX39AO00148 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.69■□□□□ 0.74
DDX39AO00148 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX39AO00148 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.69■□□□□ 0.74
DDX39AO00148 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX39AO00148 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX39AO00148 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX39AO00148 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX39AO00148 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX39AO00148 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX39AO00148 HLA-J-201ENST00000462773 1622 ntBASIC19.69■□□□□ 0.74
DDX39AO00148 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
DDX39AO00148 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
DDX39AO00148 AL133373.2-201ENST00000623187 2828 ntBASIC19.68■□□□□ 0.74
DDX39AO00148 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX39AO00148 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
DDX39AO00148 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DDX39AO00148 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
DDX39AO00148 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 AC005104.2-201ENST00000427818 678 ntBASIC19.68■□□□□ 0.74
DDX39AO00148 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.68■□□□□ 0.74
DDX39AO00148 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.68■□□□□ 0.74
DDX39AO00148 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.68■□□□□ 0.74
DDX39AO00148 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.68■□□□□ 0.74
DDX39AO00148 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.68■□□□□ 0.74
DDX39AO00148 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.68■□□□□ 0.74
DDX39AO00148 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.68■□□□□ 0.74
DDX39AO00148 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX39AO00148 AC008735.5-201ENST00000623544 497 ntBASIC19.68■□□□□ 0.74
DDX39AO00148 AF228730.7-201ENST00000641842 219 ntBASIC19.68■□□□□ 0.74
DDX39AO00148 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 AC009336.1-201ENST00000608941 1553 ntBASIC19.68■□□□□ 0.74
DDX39AO00148 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
DDX39AO00148 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DDX39AO00148 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX39AO00148 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX39AO00148 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
DDX39AO00148 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.67■□□□□ 0.74
DDX39AO00148 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
DDX39AO00148 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.67■□□□□ 0.74
DDX39AO00148 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX39AO00148 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX39AO00148 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
DDX39AO00148 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
DDX39AO00148 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX39AO00148 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX39AO00148 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX39AO00148 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX39AO00148 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX39AO00148 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.67■□□□□ 0.74
DDX39AO00148 LAGE3P1-201ENST00000425356 484 ntBASIC19.67■□□□□ 0.74
DDX39AO00148 SIGLEC30P-201ENST00000455569 941 ntBASIC19.67■□□□□ 0.74
DDX39AO00148 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.67■□□□□ 0.74
DDX39AO00148 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.67■□□□□ 0.74
DDX39AO00148 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX39AO00148 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX39AO00148 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
DDX39AO00148 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
DDX39AO00148 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
DDX39AO00148 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
DDX39AO00148 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX39AO00148 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX39AO00148 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.67■□□□□ 0.74
DDX39AO00148 LINC00304-203ENST00000565008 1864 ntBASIC19.67■□□□□ 0.74
DDX39AO00148 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
DDX39AO00148 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
DDX39AO00148 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
DDX39AO00148 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.66■□□□□ 0.74
DDX39AO00148 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DDX39AO00148 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.66■□□□□ 0.74
DDX39AO00148 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX39AO00148 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.66■□□□□ 0.74
DDX39AO00148 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.66■□□□□ 0.74
DDX39AO00148 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.66■□□□□ 0.74
DDX39AO00148 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
DDX39AO00148 AC098831.1-202ENST00000438821 336 ntBASIC19.66■□□□□ 0.74
DDX39AO00148 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms