Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Phf1Q9Z1B8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Phf1Q9Z1B8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Phf1Q9Z1B8 Gm44428-201ENSMUST00000204474 874 ntBASIC20.25■□□□□ 0.83
Phf1Q9Z1B8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Phf1Q9Z1B8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.24■□□□□ 0.83
Phf1Q9Z1B8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Phf1Q9Z1B8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Phf1Q9Z1B8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.24■□□□□ 0.83
Phf1Q9Z1B8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Phf1Q9Z1B8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.23■□□□□ 0.83
Phf1Q9Z1B8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.23■□□□□ 0.83
Phf1Q9Z1B8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Phf1Q9Z1B8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Phf1Q9Z1B8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Phf1Q9Z1B8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.22■□□□□ 0.83
Phf1Q9Z1B8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Phf1Q9Z1B8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.22■□□□□ 0.83
Phf1Q9Z1B8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf1Q9Z1B8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf1Q9Z1B8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf1Q9Z1B8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Phf1Q9Z1B8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Phf1Q9Z1B8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Phf1Q9Z1B8 Gm10420-201ENSMUST00000121713 882 ntBASIC20.21■□□□□ 0.83
Phf1Q9Z1B8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf1Q9Z1B8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf1Q9Z1B8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf1Q9Z1B8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phf1Q9Z1B8 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.2■□□□□ 0.82
Phf1Q9Z1B8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.2■□□□□ 0.82
Phf1Q9Z1B8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phf1Q9Z1B8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phf1Q9Z1B8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phf1Q9Z1B8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Phf1Q9Z1B8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phf1Q9Z1B8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Phf1Q9Z1B8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.19■□□□□ 0.82
Phf1Q9Z1B8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Phf1Q9Z1B8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Phf1Q9Z1B8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf1Q9Z1B8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf1Q9Z1B8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf1Q9Z1B8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.17■□□□□ 0.82
Phf1Q9Z1B8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf1Q9Z1B8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.17■□□□□ 0.82
Phf1Q9Z1B8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Phf1Q9Z1B8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf1Q9Z1B8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.16■□□□□ 0.82
Phf1Q9Z1B8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phf1Q9Z1B8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Phf1Q9Z1B8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Phf1Q9Z1B8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phf1Q9Z1B8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Phf1Q9Z1B8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phf1Q9Z1B8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Phf1Q9Z1B8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Phf1Q9Z1B8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Phf1Q9Z1B8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Phf1Q9Z1B8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Phf1Q9Z1B8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Phf1Q9Z1B8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Phf1Q9Z1B8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Phf1Q9Z1B8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Phf1Q9Z1B8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Phf1Q9Z1B8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Phf1Q9Z1B8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Phf1Q9Z1B8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
Phf1Q9Z1B8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Phf1Q9Z1B8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Phf1Q9Z1B8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Phf1Q9Z1B8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.1■□□□□ 0.81
Phf1Q9Z1B8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phf1Q9Z1B8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phf1Q9Z1B8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phf1Q9Z1B8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Phf1Q9Z1B8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Phf1Q9Z1B8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.08■□□□□ 0.81
Phf1Q9Z1B8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Phf1Q9Z1B8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Phf1Q9Z1B8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Phf1Q9Z1B8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.08■□□□□ 0.81
Phf1Q9Z1B8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Phf1Q9Z1B8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Phf1Q9Z1B8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Phf1Q9Z1B8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Phf1Q9Z1B8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Phf1Q9Z1B8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Phf1Q9Z1B8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Phf1Q9Z1B8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms