Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga4Q91XY4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga4Q91XY4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga4Q91XY4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdhga4Q91XY4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.55■■□□□ 1.04
Pcdhga4Q91XY4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga4Q91XY4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga4Q91XY4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga4Q91XY4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga4Q91XY4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga4Q91XY4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga4Q91XY4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga4Q91XY4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga4Q91XY4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhga4Q91XY4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhga4Q91XY4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga4Q91XY4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga4Q91XY4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga4Q91XY4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga4Q91XY4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhga4Q91XY4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhga4Q91XY4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcdhga4Q91XY4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga4Q91XY4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga4Q91XY4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga4Q91XY4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga4Q91XY4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga4Q91XY4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Pcdhga4Q91XY4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.51■■□□□ 1.03
Pcdhga4Q91XY4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga4Q91XY4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcdhga4Q91XY4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga4Q91XY4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga4Q91XY4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga4Q91XY4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga4Q91XY4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga4Q91XY4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga4Q91XY4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga4Q91XY4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhga4Q91XY4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.49■■□□□ 1.03
Pcdhga4Q91XY4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga4Q91XY4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga4Q91XY4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga4Q91XY4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhga4Q91XY4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhga4Q91XY4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga4Q91XY4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga4Q91XY4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga4Q91XY4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Pcdhga4Q91XY4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga4Q91XY4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga4Q91XY4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga4Q91XY4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdhga4Q91XY4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga4Q91XY4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.46■■□□□ 1.03
Pcdhga4Q91XY4 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.46■■□□□ 1.03
Pcdhga4Q91XY4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga4Q91XY4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga4Q91XY4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga4Q91XY4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdhga4Q91XY4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga4Q91XY4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga4Q91XY4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga4Q91XY4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga4Q91XY4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga4Q91XY4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga4Q91XY4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga4Q91XY4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhga4Q91XY4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga4Q91XY4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga4Q91XY4 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.43■■□□□ 1.02
Pcdhga4Q91XY4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga4Q91XY4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhga4Q91XY4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga4Q91XY4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga4Q91XY4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Pcdhga4Q91XY4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga4Q91XY4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhga4Q91XY4 Gm10420-201ENSMUST00000121713 882 ntBASIC21.42■■□□□ 1.02
Pcdhga4Q91XY4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Pcdhga4Q91XY4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhga4Q91XY4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga4Q91XY4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga4Q91XY4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga4Q91XY4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga4Q91XY4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga4Q91XY4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.41■■□□□ 1.02
Pcdhga4Q91XY4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Pcdhga4Q91XY4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga4Q91XY4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga4Q91XY4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga4Q91XY4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga4Q91XY4 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.4■■□□□ 1.02
Pcdhga4Q91XY4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga4Q91XY4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga4Q91XY4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhga4Q91XY4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga4Q91XY4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga4Q91XY4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
Pcdhga4Q91XY4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms