Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sft2d2Q8VD57 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sft2d2Q8VD57 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sft2d2Q8VD57 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sft2d2Q8VD57 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sft2d2Q8VD57 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sft2d2Q8VD57 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sft2d2Q8VD57 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sft2d2Q8VD57 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sft2d2Q8VD57 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sft2d2Q8VD57 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sft2d2Q8VD57 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sft2d2Q8VD57 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Sft2d2Q8VD57 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sft2d2Q8VD57 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sft2d2Q8VD57 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sft2d2Q8VD57 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sft2d2Q8VD57 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sft2d2Q8VD57 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sft2d2Q8VD57 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sft2d2Q8VD57 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sft2d2Q8VD57 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.87■□□□□ 0.45
Sft2d2Q8VD57 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.87■□□□□ 0.45
Sft2d2Q8VD57 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.87■□□□□ 0.45
Sft2d2Q8VD57 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sft2d2Q8VD57 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sft2d2Q8VD57 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sft2d2Q8VD57 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sft2d2Q8VD57 Gm30023-201ENSMUST00000197970 889 ntBASIC17.86■□□□□ 0.45
Sft2d2Q8VD57 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sft2d2Q8VD57 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sft2d2Q8VD57 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sft2d2Q8VD57 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sft2d2Q8VD57 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.85■□□□□ 0.45
Sft2d2Q8VD57 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sft2d2Q8VD57 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sft2d2Q8VD57 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sft2d2Q8VD57 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sft2d2Q8VD57 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sft2d2Q8VD57 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sft2d2Q8VD57 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sft2d2Q8VD57 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sft2d2Q8VD57 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sft2d2Q8VD57 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sft2d2Q8VD57 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.83■□□□□ 0.45
Sft2d2Q8VD57 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Sft2d2Q8VD57 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sft2d2Q8VD57 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sft2d2Q8VD57 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sft2d2Q8VD57 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sft2d2Q8VD57 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sft2d2Q8VD57 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sft2d2Q8VD57 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sft2d2Q8VD57 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sft2d2Q8VD57 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sft2d2Q8VD57 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sft2d2Q8VD57 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sft2d2Q8VD57 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sft2d2Q8VD57 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sft2d2Q8VD57 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sft2d2Q8VD57 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sft2d2Q8VD57 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sft2d2Q8VD57 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sft2d2Q8VD57 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sft2d2Q8VD57 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sft2d2Q8VD57 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sft2d2Q8VD57 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sft2d2Q8VD57 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sft2d2Q8VD57 Gm16148-201ENSMUST00000119653 893 ntBASIC17.79■□□□□ 0.44
Sft2d2Q8VD57 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sft2d2Q8VD57 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sft2d2Q8VD57 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sft2d2Q8VD57 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sft2d2Q8VD57 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sft2d2Q8VD57 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.78■□□□□ 0.44
Sft2d2Q8VD57 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sft2d2Q8VD57 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sft2d2Q8VD57 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.77■□□□□ 0.44
Sft2d2Q8VD57 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Sft2d2Q8VD57 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sft2d2Q8VD57 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sft2d2Q8VD57 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sft2d2Q8VD57 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Sft2d2Q8VD57 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sft2d2Q8VD57 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sft2d2Q8VD57 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sft2d2Q8VD57 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.76■□□□□ 0.43
Sft2d2Q8VD57 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sft2d2Q8VD57 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sft2d2Q8VD57 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.75■□□□□ 0.43
Sft2d2Q8VD57 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sft2d2Q8VD57 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sft2d2Q8VD57 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sft2d2Q8VD57 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sft2d2Q8VD57 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.75■□□□□ 0.43
Sft2d2Q8VD57 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sft2d2Q8VD57 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sft2d2Q8VD57 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sft2d2Q8VD57 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sft2d2Q8VD57 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms