Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cspg5Q71M36 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cspg5Q71M36 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.72■■□□□ 1.23
Cspg5Q71M36 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cspg5Q71M36 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cspg5Q71M36 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Cspg5Q71M36 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.71■■□□□ 1.23
Cspg5Q71M36 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Cspg5Q71M36 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Cspg5Q71M36 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cspg5Q71M36 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Cspg5Q71M36 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Cspg5Q71M36 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cspg5Q71M36 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.7■■□□□ 1.22
Cspg5Q71M36 Gm43566-201ENSMUST00000196851 808 ntBASIC22.7■■□□□ 1.22
Cspg5Q71M36 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cspg5Q71M36 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cspg5Q71M36 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cspg5Q71M36 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cspg5Q71M36 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cspg5Q71M36 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cspg5Q71M36 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
Cspg5Q71M36 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cspg5Q71M36 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
Cspg5Q71M36 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cspg5Q71M36 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cspg5Q71M36 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cspg5Q71M36 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cspg5Q71M36 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cspg5Q71M36 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cspg5Q71M36 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cspg5Q71M36 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cspg5Q71M36 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
Cspg5Q71M36 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cspg5Q71M36 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.67■■□□□ 1.22
Cspg5Q71M36 Gm45444-201ENSMUST00000211394 898 ntBASIC22.67■■□□□ 1.22
Cspg5Q71M36 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cspg5Q71M36 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cspg5Q71M36 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.66■■□□□ 1.22
Cspg5Q71M36 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cspg5Q71M36 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.66■■□□□ 1.22
Cspg5Q71M36 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.66■■□□□ 1.22
Cspg5Q71M36 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cspg5Q71M36 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cspg5Q71M36 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cspg5Q71M36 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cspg5Q71M36 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cspg5Q71M36 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cspg5Q71M36 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.64■■□□□ 1.21
Cspg5Q71M36 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Cspg5Q71M36 Gm9959-201ENSMUST00000068277 390 ntBASIC22.64■■□□□ 1.21
Cspg5Q71M36 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.64■■□□□ 1.21
Cspg5Q71M36 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Cspg5Q71M36 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cspg5Q71M36 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cspg5Q71M36 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cspg5Q71M36 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cspg5Q71M36 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Cspg5Q71M36 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.62■■□□□ 1.21
Cspg5Q71M36 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cspg5Q71M36 Gm45102-201ENSMUST00000207427 857 ntBASIC22.62■■□□□ 1.21
Cspg5Q71M36 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cspg5Q71M36 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cspg5Q71M36 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Cspg5Q71M36 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.61■■□□□ 1.21
Cspg5Q71M36 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.61■■□□□ 1.21
Cspg5Q71M36 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.61■■□□□ 1.21
Cspg5Q71M36 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Cspg5Q71M36 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.6■■□□□ 1.21
Cspg5Q71M36 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cspg5Q71M36 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cspg5Q71M36 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.6■■□□□ 1.21
Cspg5Q71M36 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.6■■□□□ 1.21
Cspg5Q71M36 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cspg5Q71M36 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cspg5Q71M36 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Cspg5Q71M36 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Cspg5Q71M36 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Cspg5Q71M36 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cspg5Q71M36 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cspg5Q71M36 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cspg5Q71M36 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.59■■□□□ 1.21
Cspg5Q71M36 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Cspg5Q71M36 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cspg5Q71M36 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cspg5Q71M36 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cspg5Q71M36 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cspg5Q71M36 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cspg5Q71M36 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Cspg5Q71M36 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cspg5Q71M36 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.58■■□□□ 1.21
Cspg5Q71M36 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.58■■□□□ 1.21
Cspg5Q71M36 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cspg5Q71M36 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cspg5Q71M36 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.57■■□□□ 1.2
Cspg5Q71M36 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cspg5Q71M36 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cspg5Q71M36 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cspg5Q71M36 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Cspg5Q71M36 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms