Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Limk1P53668 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Limk1P53668 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Limk1P53668 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Limk1P53668 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Limk1P53668 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limk1P53668 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limk1P53668 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Limk1P53668 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limk1P53668 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Limk1P53668 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limk1P53668 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limk1P53668 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limk1P53668 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Limk1P53668 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Limk1P53668 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Limk1P53668 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Limk1P53668 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limk1P53668 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Limk1P53668 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Limk1P53668 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Limk1P53668 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Limk1P53668 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Limk1P53668 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Limk1P53668 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Limk1P53668 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Limk1P53668 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Limk1P53668 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Limk1P53668 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Limk1P53668 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.69■■□□□ 1.06
Limk1P53668 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.69■■□□□ 1.06
Limk1P53668 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Limk1P53668 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Limk1P53668 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Limk1P53668 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.67■■□□□ 1.06
Limk1P53668 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.67■■□□□ 1.06
Limk1P53668 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.67■■□□□ 1.06
Limk1P53668 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Limk1P53668 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Limk1P53668 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Limk1P53668 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Limk1P53668 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.66■■□□□ 1.06
Limk1P53668 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Limk1P53668 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Limk1P53668 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Limk1P53668 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Limk1P53668 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Limk1P53668 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.65■■□□□ 1.06
Limk1P53668 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Limk1P53668 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Limk1P53668 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Limk1P53668 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Limk1P53668 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Limk1P53668 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.64■■□□□ 1.06
Limk1P53668 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.64■■□□□ 1.06
Limk1P53668 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Limk1P53668 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Limk1P53668 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Limk1P53668 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Limk1P53668 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.63■■□□□ 1.05
Limk1P53668 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Limk1P53668 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Limk1P53668 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Limk1P53668 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.62■■□□□ 1.05
Limk1P53668 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Limk1P53668 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.62■■□□□ 1.05
Limk1P53668 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Limk1P53668 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Limk1P53668 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Limk1P53668 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Limk1P53668 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Limk1P53668 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.61■■□□□ 1.05
Limk1P53668 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Limk1P53668 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Limk1P53668 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Limk1P53668 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Limk1P53668 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Limk1P53668 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Limk1P53668 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Limk1P53668 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Limk1P53668 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Limk1P53668 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.58■■□□□ 1.05
Limk1P53668 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Limk1P53668 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
Limk1P53668 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.58■■□□□ 1.05
Limk1P53668 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Limk1P53668 Gm7417-201ENSMUST00000192950 473 ntBASIC21.58■■□□□ 1.05
Limk1P53668 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Limk1P53668 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Limk1P53668 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Limk1P53668 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Limk1P53668 Gm9847-201ENSMUST00000052528 599 ntBASIC21.57■■□□□ 1.04
Limk1P53668 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Limk1P53668 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Limk1P53668 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Limk1P53668 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.56■■□□□ 1.04
Limk1P53668 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Limk1P53668 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Limk1P53668 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Limk1P53668 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms