Protein–RNA interactions for Protein: D3YYI7

Rnf217, Probable E3 ubiquitin-protein ligase RNF217, mousemouse

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf217D3YYI7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf217D3YYI7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rnf217D3YYI7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf217D3YYI7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf217D3YYI7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rnf217D3YYI7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf217D3YYI7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf217D3YYI7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf217D3YYI7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf217D3YYI7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf217D3YYI7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Rnf217D3YYI7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.83■□□□□ 0.76
Rnf217D3YYI7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf217D3YYI7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf217D3YYI7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf217D3YYI7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rnf217D3YYI7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rnf217D3YYI7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf217D3YYI7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf217D3YYI7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rnf217D3YYI7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf217D3YYI7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf217D3YYI7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf217D3YYI7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf217D3YYI7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rnf217D3YYI7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf217D3YYI7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf217D3YYI7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf217D3YYI7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf217D3YYI7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf217D3YYI7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf217D3YYI7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf217D3YYI7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.78■□□□□ 0.76
Rnf217D3YYI7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf217D3YYI7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Rnf217D3YYI7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf217D3YYI7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.78■□□□□ 0.76
Rnf217D3YYI7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.78■□□□□ 0.76
Rnf217D3YYI7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf217D3YYI7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf217D3YYI7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf217D3YYI7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf217D3YYI7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf217D3YYI7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf217D3YYI7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf217D3YYI7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf217D3YYI7 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.75■□□□□ 0.75
Rnf217D3YYI7 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.75■□□□□ 0.75
Rnf217D3YYI7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf217D3YYI7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf217D3YYI7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf217D3YYI7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf217D3YYI7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.74■□□□□ 0.75
Rnf217D3YYI7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rnf217D3YYI7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rnf217D3YYI7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf217D3YYI7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf217D3YYI7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf217D3YYI7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf217D3YYI7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf217D3YYI7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf217D3YYI7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf217D3YYI7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.72■□□□□ 0.75
Rnf217D3YYI7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf217D3YYI7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf217D3YYI7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf217D3YYI7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf217D3YYI7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf217D3YYI7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf217D3YYI7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf217D3YYI7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf217D3YYI7 Gm7432-201ENSMUST00000210343 879 ntBASIC19.7■□□□□ 0.74
Rnf217D3YYI7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf217D3YYI7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Rnf217D3YYI7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf217D3YYI7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf217D3YYI7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf217D3YYI7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.69■□□□□ 0.74
Rnf217D3YYI7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf217D3YYI7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.69■□□□□ 0.74
Rnf217D3YYI7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf217D3YYI7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf217D3YYI7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Rnf217D3YYI7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf217D3YYI7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf217D3YYI7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf217D3YYI7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf217D3YYI7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf217D3YYI7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rnf217D3YYI7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf217D3YYI7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf217D3YYI7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.68■□□□□ 0.74
Rnf217D3YYI7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.68■□□□□ 0.74
Rnf217D3YYI7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
Rnf217D3YYI7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf217D3YYI7 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.67■□□□□ 0.74
Rnf217D3YYI7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf217D3YYI7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Rnf217D3YYI7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf217D3YYI7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms