Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV8-2A0A0B4J237 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-2A0A0B4J237 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV8-2A0A0B4J237 CR559946.2-201ENST00000623684 991 ntBASIC18.43■□□□□ 0.54
TRAV8-2A0A0B4J237 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-2A0A0B4J237 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-2A0A0B4J237 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAV8-2A0A0B4J237 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV8-2A0A0B4J237 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-2A0A0B4J237 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.42■□□□□ 0.54
TRAV8-2A0A0B4J237 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-2A0A0B4J237 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-2A0A0B4J237 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-2A0A0B4J237 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-2A0A0B4J237 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.42■□□□□ 0.54
TRAV8-2A0A0B4J237 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-2A0A0B4J237 ABHD17AP4-201ENST00000411545 909 ntBASIC18.41■□□□□ 0.54
TRAV8-2A0A0B4J237 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV8-2A0A0B4J237 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-2A0A0B4J237 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-2A0A0B4J237 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-2A0A0B4J237 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV8-2A0A0B4J237 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV8-2A0A0B4J237 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV8-2A0A0B4J237 ERN1-208ENST00000606895 2068 ntBASIC18.4■□□□□ 0.54
TRAV8-2A0A0B4J237 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV8-2A0A0B4J237 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV8-2A0A0B4J237 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV8-2A0A0B4J237 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV8-2A0A0B4J237 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRAV8-2A0A0B4J237 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.39■□□□□ 0.54
TRAV8-2A0A0B4J237 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV8-2A0A0B4J237 AL359258.2-201ENST00000564063 1566 ntBASIC18.39■□□□□ 0.53
TRAV8-2A0A0B4J237 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-2A0A0B4J237 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-2A0A0B4J237 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAV8-2A0A0B4J237 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-2A0A0B4J237 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-2A0A0B4J237 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-2A0A0B4J237 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRAV8-2A0A0B4J237 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-2A0A0B4J237 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV8-2A0A0B4J237 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-2A0A0B4J237 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV8-2A0A0B4J237 AC010501.1-201ENST00000606270 1962 ntBASIC18.38■□□□□ 0.53
TRAV8-2A0A0B4J237 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV8-2A0A0B4J237 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-2A0A0B4J237 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-2A0A0B4J237 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV8-2A0A0B4J237 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAV8-2A0A0B4J237 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV8-2A0A0B4J237 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV8-2A0A0B4J237 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRAV8-2A0A0B4J237 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-2A0A0B4J237 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV8-2A0A0B4J237 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV8-2A0A0B4J237 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-2A0A0B4J237 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-2A0A0B4J237 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
TRAV8-2A0A0B4J237 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV8-2A0A0B4J237 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-2A0A0B4J237 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV8-2A0A0B4J237 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
TRAV8-2A0A0B4J237 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-2A0A0B4J237 MIR3648-2-201ENST00000581792 180 ntBASIC18.35■□□□□ 0.53
TRAV8-2A0A0B4J237 MIR3648-1-201ENST00000615959 180 ntBASIC18.35■□□□□ 0.53
TRAV8-2A0A0B4J237 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRAV8-2A0A0B4J237 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV8-2A0A0B4J237 AL359504.2-201ENST00000605506 1601 ntBASIC18.34■□□□□ 0.53
TRAV8-2A0A0B4J237 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-2A0A0B4J237 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.34■□□□□ 0.53
TRAV8-2A0A0B4J237 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-2A0A0B4J237 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-2A0A0B4J237 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-2A0A0B4J237 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-2A0A0B4J237 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-2A0A0B4J237 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-2A0A0B4J237 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-2A0A0B4J237 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV8-2A0A0B4J237 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-2A0A0B4J237 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-2A0A0B4J237 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TRAV8-2A0A0B4J237 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.31■□□□□ 0.52
TRAV8-2A0A0B4J237 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV8-2A0A0B4J237 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV8-2A0A0B4J237 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRAV8-2A0A0B4J237 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRAV8-2A0A0B4J237 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRAV8-2A0A0B4J237 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV8-2A0A0B4J237 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms