Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
DDX49Q9Y6V7 KRT18P55-202ENST00000578578 1546 ntBASIC21.08■□□□□ 0.96
DDX49Q9Y6V7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX49Q9Y6V7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DDX49Q9Y6V7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX49Q9Y6V7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DDX49Q9Y6V7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
DDX49Q9Y6V7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.96
DDX49Q9Y6V7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX49Q9Y6V7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 LINC00265-3P-201ENST00000447588 903 ntBASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 AP000867.3-201ENST00000524675 377 ntBASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 AC005332.3-201ENST00000589904 676 ntBASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX49Q9Y6V7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX49Q9Y6V7 AL355312.1-201ENST00000407115 2176 ntBASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 AL121761.2-201ENST00000598007 1648 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 218.8 ms